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scnpilot_expt_750_bf_scaffold_107_23

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 22513..22797

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UAH6_RALPJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 3.30e-47
putative conjugal transfer TrbD transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 9.30e-48
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ACD27773.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 4.60e-47

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAGCGCGGCCCACGATGGCGTGCAGGGGTTCGCTCCGGGGTTCGAAGTGCCACTGCACCGCTCGCTGACCGAGCCGATCCTGCTGGGCGGCGCGCCGCGCACGGTGGCGATTGCCAATGGCACCTTGGCCGCGGCCGTGGGCTTGGGCCTGCAACTGTGGATTCCGGGCCTGGTGCTCTGGATCGCCGGCCATGCGTTGGCGGTCTGGGGCGCGCGTGTCGATCCGCGGTTCATGCAAGTCTTCGCGCGCCATATCAAGCACCGGCCGCTGCTGGACGTGTAG
PROTEIN sequence
Length: 95
MSAAHDGVQGFAPGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGLVLWIAGHALAVWGARVDPRFMQVFARHIKHRPLLDV*