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scnpilot_expt_750_bf_scaffold_107_31

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(31610..31993)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000381AE24 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 125.0
  • Bit_score: 228
  • Evalue 3.70e-57
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|SAAS:SAAS00062113}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=34073 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 125.0
  • Bit_score: 229
  • Evalue 3.00e-57
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 125.0
  • Bit_score: 227
  • Evalue 1.80e-57

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAGAATGAATGCTGCCGATTTCACGCTCGAGGCTCTAGAAACGCCTGCGCTGACCAAGGCGCATCTGGCCGACCTGCTGTTCGAGCAGATCGGCCTGAACAAGCGTGAGTCCAAGGACATGGTCGAGGCGTTCTTCGAGCTCGTGGCGAACAGCCTGATCGAAGGCACGGACGTGAAGATCTCGGGCTTCGGCAACTTCCAGATCCGCGTGAAGGCGCCGCGCCCTGGTCGCAATCCGCGCACCGGCGAAGCCATTCCGATCGGCGAGCGCCGCGTGGCCACGTTCCACGCGAGCGCCAAGCTCAAGGAGCAGATTCACGGCAACATCGACCCGCAGGCCGCTGGTACGACCGAGGTCGAGTGGAGCCTTGGCACCGAGTGA
PROTEIN sequence
Length: 128
MRMNAADFTLEALETPALTKAHLADLLFEQIGLNKRESKDMVEAFFELVANSLIEGTDVKISGFGNFQIRVKAPRPGRNPRTGEAIPIGERRVATFHASAKLKEQIHGNIDPQAAGTTEVEWSLGTE*