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scnpilot_expt_750_bf_scaffold_12_10

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 14 / 38 MC: 1
Location: 11961..12557

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5S7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 9.70e-57
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 2.70e-57
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99069.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 1.40e-56

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCCTTCGCCATCCAGCGCGACATCCTCGATTCAGCGGTCACCGGCGACGCCGCAGCCCTCGACAGCGTCCTCAAGACGATCACGCCCCACGTCGAGCGGCAGCTCCTCCGGTACCCCGTGAGCGACGAGGACCGGCGCGACCTCCTCCAGGCGACCCTGATGCAGATCGTCCGCCGCCTCGGCTCGTTCCGCGCAGAGGCGAGCTTCTCGACCTGGCTGTTCCGCGTGACCGCGAACGAAGCGCTGATGCTCATGCGCTCGCGACGCCGCCATCGCGCGCGCTTCGTCGAGGGCCTCGAGTGGGAAGAGCTCGCGACGCTTCCCGCGATGAACGACACCGATCACGTCGACGGTGACCTCGGGATCAGCGCCCGGCAGCGTGACGAGCGCGTCCGCGATGCGCTCGGGGAGCTCCCCGACGACTACCGCGACGTCGTCATCGCCCACTACCACATGGACCTCGGCCTCCAGGAGATCGCCGACCGCCTCTCGATCACCGAGAGCGCCGTACGCTCGAGGTTGCACCGCGCACGCTCGCGCCTCCGTTCGCTGCTCGAAAAGCGAGACCTCGACGCGTACACTGTCGCGGCCTGA
PROTEIN sequence
Length: 199
MAFAIQRDILDSAVTGDAAALDSVLKTITPHVERQLLRYPVSDEDRRDLLQATLMQIVRRLGSFRAEASFSTWLFRVTANEALMLMRSRRRHRARFVEGLEWEELATLPAMNDTDHVDGDLGISARQRDERVRDALGELPDDYRDVVIAHYHMDLGLQEIADRLSITESAVRSRLHRARSRLRSLLEKRDLDAYTVAA*