ggKbase home page

scnpilot_expt_750_bf_scaffold_2437

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2437_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2437_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237..1502)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003755E2A rbh
Sphingomonas taxi strain 30a NODE_24, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26104.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
major facilitator transporter
scnpilot_expt_750_bf_scaffold_2437_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1578..1916)
DNA (339bp) protein (113aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB20
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AJP73478.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2437_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1898..3265)
DNA (1368bp) protein (456aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas melonis RepID=UPI000363486A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AJP73478.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2437_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3959..4612
DNA (654bp) protein (218aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630D74 rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP73477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
scnpilot_expt_750_bf_scaffold_2437_6
unknown

Not on your lists

4657..5136
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2437_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5650)
DNA (510bp) protein (170aa)
Putative ATPase n=1 Tax=Rhizobium sp. CF142 RepID=J2L7Y9_9RHIZ
Putative ATPase {ECO:0000313|EMBL:EJJ29612.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
hypothetical protein
scnpilot_expt_750_bf_scaffold_2437_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5653..6204)
DNA (552bp) protein (184aa)
chitinase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D76
Strain SA-120 Contig225, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01555.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
chitinase
scnpilot_expt_750_bf_scaffold_2437_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6201..6710)
DNA (510bp) protein (170aa)
ubiquinol-cytochrome C chaperone n=1 Tax=Sphingomonas elodea RepID=UPI0002630D77
ubiquinol-cytochrome C chaperone
Ubiquinol-cytochrome C chaperone {ECO:0000313|EMBL:AJP74661.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
scnpilot_expt_750_bf_scaffold_2437_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6846..7328
DNA (483bp) protein (161aa)
membrane protein SmpA n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DD38FB
membrane protein SmpA
Membrane protein SmpA {ECO:0000313|EMBL:AJP74660.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_expt_750_bf_scaffold_2437_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7517..9526)
DNA (2010bp) protein (670aa)
penicillin-binding protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4CA rbh
penicillin-binding protein
Penicillin-binding protein {ECO:0000313|EMBL:AJP74659.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
scnpilot_expt_750_bf_scaffold_2437_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9731..13492)
DNA (3762bp) protein (1254aa)
alpha-2-macroglobulin n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4C9 rbh
alpha-2-macroglobulin
Alpha-2-macroglobulin {ECO:0000313|EMBL:AJP73473.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
Displaying 12 items

View Taxonomy