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scnpilot_expt_750_bf_scaffold_2826_17

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: 14600..14956

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 5.90e-39
rRNA methyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000309DF77 similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 119.0
  • Bit_score: 175
  • Evalue 3.40e-41
rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 1.20e-39

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGCGACTAGCCCTGTTCGAGCCCGATATCGCCGGCAATGTGGGTGCCGTGCTGCGCCTCGGCGCCTGTTTCGGCGCACCCGTGGATCTGATCGAACCGATGGGATTCGCCTGGAACGATGCGGCGCTGCGCCGCGCCGCGATGGACTATGGCGGCCAGGCCGATGTGATCCGCCATGTCGATTTCGATGCCTTCGCCGCCGGGCTGACCGGCCGGCTGGTGCTGTTCACCACCCGCGGCGCCGAGCGGCTGGACATCGCCCGCTTCCAGCCGGGCGACACCTTGCTGTTCGGATCGGAGAGCCGCGGCGCTCCCGATCACGTCCACGCCCGCGCCGATCTTGCCGTGCGCATCCCG
PROTEIN sequence
Length: 119
MRLALFEPDIAGNVGAVLRLGACFGAPVDLIEPMGFAWNDAALRRAAMDYGGQADVIRHVDFDAFAAGLTGRLVLFTTRGAERLDIARFQPGDTLLFGSESRGAPDHVHARADLAVRIP