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scnpilot_expt_750_bf_scaffold_1135_1

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 3..1850

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 623.0
  • Bit_score: 953
  • Evalue 1.40e-274
  • rbh
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EIL93071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 623.0
  • Bit_score: 953
  • Evalue 1.90e-274
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 635.0
  • Bit_score: 737
  • Evalue 3.30e-210

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1848
AAGGATGGCGAAGTTGCGCTGCTGCCGTTGCTGGGCAGCTCGATGACGGTCACGTTCGACACCGGCGACTACACCCGGCATTTCAATGGCATCGTGGCGGAGATTTCGCAGACGGGGTTCGAGAGCTTTTCCGGCAAGCGCCAGGCGGAGTACGCGTTGACCCTGGTGCCGAAGCCCTGGTTGCTGCTGCACAAGATCGATTGCCGCATCTATCTCAAGAAGTCCGTGCCGACGATCGTCAAGGACGTGCTCGCCGAAATCGGCTACAGCGACGTCAAGCTGAGCCTGAGTGGCGACTACCCGGAGCGCGATTACTGCGTGCAGTACCGCGAGAGCTACTTCAACTTCATCAGCCGACTGATGGAGCAGGAGGGCATCTACTATTTCTTCCAGCACCGTGATGGCGTGCACACGATGGTGCTGGCCGATTCGCTCGGTGCGCACGGAGCCACCGGCGGCTTCGACGAATTGCCGTATCGGCCGCAGACCGGCACCAGCAAGGCGTCAAGCGAGCCGGCGATCACCGAGTTCAGCACCGCGCGTTCGGTGCAGACGATCAAGTATTCGCTGACCGACTACGACCCGCTGGACCCGAAGAAGTCGCTGCTGGGGTTCGAGTCGATCAGCAACGCCGACGGCAACCATCGGGTGCCCAAGCTCGATTCGTTCGACTACCCCGGCGACCACCTGACCGCCGCCGCCGGCAAGCATTACGCGCAGGTTCGGCTGGAGGCGATCAACGTCGCGCAGTCGCTTTGCACCGGCGCGACCAACGTCTGCGGCGTGCTGACCGGCGCGCTGTTCAAGCTGACCAAGTTCCCGCGCGCGGAGTTGAACCAGGAATACCTCGTGGTCGGCTCCACCGTGCACATCGAGAATGCCGCCGAGGTCTCCGGCGTGCAGGGCAGCAACCAGTTCTTCTGCCATTTCTCGGCGATCCAGAGTCGCCAGCCGTTTCGCAGCATGCCGACCGCGGTCAAGCCCGGCATCGTCGGCCTGCAGACCGCGGTGGTCTCCGGCAGCGACACCGCCGAAGACATCTCGGTGGACAAGTACGGCCGCATCCAGGTCACGTTCCACTGGAACAAGCCGGACAAGGAAAACTTCCACATCTCCTGTCCGGTGCGCGTGGCCTCCTCGTGGGCCGGCAAGAACTGGGGCGCGGTGAACATCCCGCGCGTCGGCCAGGAAGTGGTGGTGAGCTTCCTCGAAGGCGATCCGGACCGGCCGCTGGTGATCGGCAGCGTCTACAACGCCGACAACATGCCGCCGTACACGCTGCCCGACAACATGACCCAGAGCGGCATCAAGAGCCGCAGCCACAAGGGCGGCGGCGCGGAGGATTTCAACGAGCTTCGCTTCGAGGACAAGAAGGGCAGCGAAGACTTCTTCATGCATGCGCAGAAGGACATGCATGTGGAAGTGGAGAACGACCGTGTCGTGACGGTGGACCACGACGAGAAGATGACCGTCAAGAACGACCAGACCGAGGACGTCACGGGCAAGCGCACGACCACCGTGGGCAAGGACGACAAGCTTGACGTCACCGGCAACGGCACGACCACCATCGGGCAGAAGTTCAAGCTCAGCGCGGGCACCGAGATCGAGCTGGTGACCGGTGCGGCGAGCATCGTGATGAAGTCATCCGGCGCCATCGACATCAAGGGCGTGAACGTCAGCATCAAGGGCGTGAGCGTCAAGATCGACGGCGACGCCACGGTGGCGGCCAAGGCCGGTGCCTCGGCGGAGTTTTCCAGCAGCGGTGCGACCACGGTCAAGGGCACCATGCTGTCGCTCAAGGGCGACGCCATGGCGCAGTTGTCCGGCGGCATCATCATGATCGGCTAG
PROTEIN sequence
Length: 616
KDGEVALLPLLGSSMTVTFDTGDYTRHFNGIVAEISQTGFESFSGKRQAEYALTLVPKPWLLLHKIDCRIYLKKSVPTIVKDVLAEIGYSDVKLSLSGDYPERDYCVQYRESYFNFISRLMEQEGIYYFFQHRDGVHTMVLADSLGAHGATGGFDELPYRPQTGTSKASSEPAITEFSTARSVQTIKYSLTDYDPLDPKKSLLGFESISNADGNHRVPKLDSFDYPGDHLTAAAGKHYAQVRLEAINVAQSLCTGATNVCGVLTGALFKLTKFPRAELNQEYLVVGSTVHIENAAEVSGVQGSNQFFCHFSAIQSRQPFRSMPTAVKPGIVGLQTAVVSGSDTAEDISVDKYGRIQVTFHWNKPDKENFHISCPVRVASSWAGKNWGAVNIPRVGQEVVVSFLEGDPDRPLVIGSVYNADNMPPYTLPDNMTQSGIKSRSHKGGGAEDFNELRFEDKKGSEDFFMHAQKDMHVEVENDRVVTVDHDEKMTVKNDQTEDVTGKRTTTVGKDDKLDVTGNGTTTIGQKFKLSAGTEIELVTGAASIVMKSSGAIDIKGVNVSIKGVSVKIDGDATVAAKAGASAEFSSSGATTVKGTMLSLKGDAMAQLSGGIIMIG*