ggKbase home page

scnpilot_expt_750_bf_scaffold_1135_6

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 6929..10456

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein IcmF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 999.99
  • Bit_score: 2085
  • Evalue 0.0
  • rbh
Type VI secretion protein IcmF {ECO:0000313|EMBL:EIL93076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 999.99
  • Bit_score: 2084
  • Evalue 0.0
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 999.99
  • Bit_score: 1654
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3528
GTGGGCAAGCTTCTTGCGCTGTTCAAATCCCGCCTGTTCATCACCCTCGTCGGCCTGCTGCTGCTGGGTCTGCTGATCTGGTTCGGCGGCCCCTACCTCGGTTTCGGCGAGTCGCATCCGCTGGAAAGCCAGGTCGTGCGGCTGCTGGTGATCCTGGTGATCGTGGTGATCTGGGCGGTGTGGCTGCAGGTGCGGCAGATGCGCGTGCGCGGCAAGGCGCGGCAGATGGCCAGTGACCTCAGCGAGCAGGGTGCGCCGGCGACTGCGGGCATCGACGATCGCGCCGCCAACGAACGCGCGCAATTGCAGGGGCGCTTCCAGGAAGCGGTGGACACCTTGCGCAAGAACCGCAGCGGCGGCACCAACCTGTACGCGCTGCCCTGGTACGTGGTGATCGGCCCGCCGGGTTCGGGCAAGAGCACCCTGCTGCAGAACTCCGGCCTCAACTTCCCGCTGTCGAACAAGTTCGGCAAGGAAGCGATCCGCGGCGTCGGCGGCACCCGCAACTGCGACTGGTGGTTCACCGACGAGGCGGTGTTCCTGGATACCGCCGGACGCTACACCACCCAGGACTCCGACCGCGGCGCGGATGCGTCGGCGTGGACGGAGTTCCTCAACCTGCTGCGCAAGTACCGCAAGCGGCGGCCGATCAACGGCGTGATCGTGGCGATGAGCCTGTCGGACCTGCTCACCCTGGATGAGGCCGGGCGGCAGCAGCACATCATGGCGGTGCGGCAGCGGCTGGACGAGCTGGCCAAGCACCTGCGCATCGGGGTGCCGGCCTACCTGGTGTTCACCAAGTGCGACCTGGTGGCCGGCTTCACCGAGTTCTTCGACGACCTCACGCCGGAGCTGCGCAGCCAGGTCTGGGGCATGTCGTTCCCGGTCGACCAGACCATGGCCGGCACCGCGGCCAAACAGTTCCTGGCGGAGTTCAACCTGCTGCTGGAGCGGCTCAACACGCGCATCCTCGATCGCCTGCATCGCGAGCGCGACCGCCAGCGGCGCGCGGCGATCCTGTCGTTTCCGCAGCAGCTGGGCGCCTTGCGCGAGATCACCCGGCAGTTCGTCGAAGGCGTGTTCACTGGCCATCAGTACGACGCGCCGCTGCTGCTGCGTGGCGCGTATTTCACCTCCGGCACGCAGGAAGGCACGCCGATCGACCGCATGATGGGCGCGGTGGCGCGCACCTTCGGGCTGGACGCCTCGCGCCTGCACGTGCCCGGCGCGCAGAGCCGCACTTTCTTCGTCGAGCGTCTGCTCAAGGACGTGCTGTTCCGCGAATCGGGCTTCGCCGGCACCGATCCCAAGCTGGAGCGCCAGAAGGTGCTGCTGCAGGCGGCCTGCTACATCGGCGTGCTGCTGGCCTGCGGCCTGCTGGTGTTCGGCCTGGCCACCAGCTATCGGCGCAACGGCAATTATCTGGCCGACGTGCACACGGCGCTGGCCAAGTATCCGGCGCAGAGCGATCTCTCGCTGGCGCCGAACCAGCAGGCGTATTTCGCGCTGGTGCTGGAGCGGCTGGAAGCGCTGTCCGCGGCGGTCGACGTGGCCGACCAGCACCAGGGCGACGTGCCGCTGTCGATGCGCCTGGGCCTGTACCAGGGCAACGCGGTGGGCGACGAGGTGCGCGATGCGTACTACCGCGAGCTCAACGCGATCCTGCTGCCCGGCGTGGCCTCGCAGTTCCGCGCCGGGCTGGCCGCCAACGCCGGCGACCCGCAGATGCTTTATTACTACCTGAAGGGTTACCTGATGCTGGGCGAGCCCAAGCATCTGGACCACGACCAGATCGTGGCGCTGGCCGGGGTCGAGTGGCAGCGCCTGTTTCCGAACGACCCGGTGCTGCAGAAGGCGCTGAGCAAGCACTTCGACGCACTGGTCGCGCACGAGGGGCGCCTGCGCCCGCTGAGCCTGGACGACAACCTGGTCGAGCAGGCGCGCAGCACGCTGCGCACGGCCGACCTGGCCACCCTGATCTACGGCAACCTCAAGCTCACCGCCGGCAGCGGCAGCTACCCGCCGTTGCGGCTGGACAAGGAACTGGGCCTGCTCGGCAACGTGTACCAGCGGCGCAGCGGCAAACCGCTGTCCGATCCGATCCCGGCGTTGTTCACCCAGCCGGTGTTCAAGCATGAGGTGGACAAGGGCATCGAACAGTCGGTGGCGCAGTTCGCCGCGGACGACTGGGTCTTCGGCGCCACCAAGATCGACGCGGTGCAGAAGGCTCAGCTCGCGCAACAGGTGCTCGGGCTTTACGAGCAGGACTACATCAAGGCCTGGGACGATGTTCTCGCCGACCTGCAACTGCAGCCGATCAACAACATCCAGGACGCCAGCGCCATCGCCGCCAAGCTGGCCGGCCCCAACTCGCCGCTGAAGCTGCTGCTCAAGGTGGTGCGCGACAACACCAGCGACCTGATGCGCGCGCCGCCCGGCGATGCCGCCGACAAGGCCGAGGACGTGGCCAAGAAGCTGGCGCAGCAGCGTGCCACGCAAACTGCGCTGGCGCGGGCGCTGGCGCAGGCCGGGGCCACCGGTGCGGCGGGTGGCGATGCAGCCAGCGAGAAACCGGGCAAGGTCATCAGTGACCATTTCGCCGAGATCGACAAGCTCACCGAGGGCGCGCCCGGCGCGCAGCCGATCGACCAGACCCTGAAGACGCTGGACGACCTCAGCAAGACCTTGCTGACCATGGGCGATTTCAGCAACGCGGCCGGCCAGCCCAACCCGCAGTTGCTGCTGGCCCAGCAGGCTGCGGCGCAACTCCCGCCGCCGGCCTCCAACTGGTTTGCCGCACTCACCGGCAAGAGCCAGGCGCTGGTGGCCAGCGGCACCAAGAGCGCGCTGGACGACCAGTACCAGCAGGCCGTCGGCAAGGACTGCGCCGACTTCACCCGCGGACGCTACCCGTTCTCGCCGTCGAGCAACAACGACATCCCGCTGCAGAACTTCGGCGAGCTGTTCGGCTATGGCGGTCGCTTCGACAGCTTCTACAACCAGACCGCCGGCAAGCTGATCGACGCCAGTGGCCGCAACTGGCAATGGAAGACCGGGCCCGGCGCGATCAGCGGCTCGGCCGGAATGCTGGGTCAGTTGCAGGGCGCCGACCGGATCAAGCAGATGTTCTTCCGCAGCGGCAACCTGCCGGAAGTCGATTTCACCTGGCTCACGCCGGTGCTTGATGCCGGCATCGGCAAGCTGGTGATCGACGTCGACGGGCAGAAATACGAATACCAGCCGGGTGGCGCGACCAACGTCAGCATGAAATGGCCCGGACCGCAGCCGGGCCGCGTCTCCATCTCCGCCTACGACACCGCCGGCAACCTGCTCACCACGTTCGACTATCGCGGCGACTGGGCGTTCTTCCGCGCACTGCAGGCGGCCAACCTGCAGAAGCAGTCCGACCTGCGCTTCGTGGCCAGTTTCAATTTCGGCGGCCACGTGGCGAAGGTGACGCTGCAAGCCAACAACCTGAAGAATCCGTTCCTCAGCAACGCCCTGTCCAGCTTCCGGTGCGGAGGCTGA
PROTEIN sequence
Length: 1176
VGKLLALFKSRLFITLVGLLLLGLLIWFGGPYLGFGESHPLESQVVRLLVILVIVVIWAVWLQVRQMRVRGKARQMASDLSEQGAPATAGIDDRAANERAQLQGRFQEAVDTLRKNRSGGTNLYALPWYVVIGPPGSGKSTLLQNSGLNFPLSNKFGKEAIRGVGGTRNCDWWFTDEAVFLDTAGRYTTQDSDRGADASAWTEFLNLLRKYRKRRPINGVIVAMSLSDLLTLDEAGRQQHIMAVRQRLDELAKHLRIGVPAYLVFTKCDLVAGFTEFFDDLTPELRSQVWGMSFPVDQTMAGTAAKQFLAEFNLLLERLNTRILDRLHRERDRQRRAAILSFPQQLGALREITRQFVEGVFTGHQYDAPLLLRGAYFTSGTQEGTPIDRMMGAVARTFGLDASRLHVPGAQSRTFFVERLLKDVLFRESGFAGTDPKLERQKVLLQAACYIGVLLACGLLVFGLATSYRRNGNYLADVHTALAKYPAQSDLSLAPNQQAYFALVLERLEALSAAVDVADQHQGDVPLSMRLGLYQGNAVGDEVRDAYYRELNAILLPGVASQFRAGLAANAGDPQMLYYYLKGYLMLGEPKHLDHDQIVALAGVEWQRLFPNDPVLQKALSKHFDALVAHEGRLRPLSLDDNLVEQARSTLRTADLATLIYGNLKLTAGSGSYPPLRLDKELGLLGNVYQRRSGKPLSDPIPALFTQPVFKHEVDKGIEQSVAQFAADDWVFGATKIDAVQKAQLAQQVLGLYEQDYIKAWDDVLADLQLQPINNIQDASAIAAKLAGPNSPLKLLLKVVRDNTSDLMRAPPGDAADKAEDVAKKLAQQRATQTALARALAQAGATGAAGGDAASEKPGKVISDHFAEIDKLTEGAPGAQPIDQTLKTLDDLSKTLLTMGDFSNAAGQPNPQLLLAQQAAAQLPPPASNWFAALTGKSQALVASGTKSALDDQYQQAVGKDCADFTRGRYPFSPSSNNDIPLQNFGELFGYGGRFDSFYNQTAGKLIDASGRNWQWKTGPGAISGSAGMLGQLQGADRIKQMFFRSGNLPEVDFTWLTPVLDAGIGKLVIDVDGQKYEYQPGGATNVSMKWPGPQPGRVSISAYDTAGNLLTTFDYRGDWAFFRALQAANLQKQSDLRFVASFNFGGHVAKVTLQANNLKNPFLSNALSSFRCGG*