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scnpilot_expt_750_bf_scaffold_1363_6

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_67_8_fragment

partial RP 27 / 55 BSCG 27 / 51 MC: 3 ASCG 10 / 38
Location: 5011..5469

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter denitrificans RepID=I4WXH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 151.0
  • Bit_score: 248
  • Evalue 4.10e-63
small protein A (tmRNA-binding) similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 151.0
  • Bit_score: 248
  • Evalue 1.20e-63
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 151.0
  • Bit_score: 248
  • Evalue 5.70e-63

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGCAAAAGCTGATCATCCTGCCGGTTGTTGCGCTGCTGGCACTTGCCGTCGCCGGTTGCCACATCGCGTACACGCCGGACGTGCAGCAAGGCAATCTGCTGGACGAAAAGATGGTGGATCAGCTCAAACCGGGGATGACGAAGCACCAGGTCCTTCTGCTGCTCGGCACGCCATCGGTGCGCACGCCGTTCGACAACAGCCGCTGGGACTACGTGTCCACCCAGTCCCGCCGCGGCGGCAAGCCCAAGGTGCGCACGTTCAAGCTGACCTTCAACAACGACACCCTGGTGCACACCGAAGGCGACTTCTTCGCCCGCGACCCGCAGCAGCTGATCAGGGAAAGCCGCAAGTACAACTCGGGTTATCCGGCGAACGAAACCCAGGGCGACAAGAGCCAGTCACCGGATGACAAGAAGAACGACGGCGGCCTGGGCCAGGGGACCGACGGCGGCCATTGA
PROTEIN sequence
Length: 153
MQKLIILPVVALLALAVAGCHIAYTPDVQQGNLLDEKMVDQLKPGMTKHQVLLLLGTPSVRTPFDNSRWDYVSTQSRRGGKPKVRTFKLTFNNDTLVHTEGDFFARDPQQLIRESRKYNSGYPANETQGDKSQSPDDKKNDGGLGQGTDGGH*