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scnpilot_expt_750_bf_scaffold_1639_12

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: 11209..11520

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=2 Tax=Nitrosococcus oceani RepID=Q3JED3_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 1.80e-25
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 4.90e-26
XRE family transcriptional regulator {ECO:0000313|EMBL:KFI20767.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosoco similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 123
  • Evalue 2.50e-25

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Taxonomy

Nitrosococcus oceani → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAAAAAGCTCAGCAAGGAAATCCTGGAGCGCGATGCCCAGCGCGATATCGGCCAGGAAGTTCTGCAGGCCGTCCGCGAGATCAAGGCCGGCGGCGGGCGGCGCTTTACCGTGCAGGTGGCGGAAGCCACCGAGGCCCGCCTCAAGCTCGGTTTGTCGCAGGCCGACTTCGCCGCGATGCTTGGCGTCTCCACGCGCACCTTGCAGGATTGGGAGCAGGGCAGGCGCAAGCCGAGTGGTGCAGCCAAGGCGTTGCTGAAAGTGGCGGTGGCGGCTCCGAATACGGTGCGCAAGGTACTTGCGGCGGCTTGA
PROTEIN sequence
Length: 104
MKKLSKEILERDAQRDIGQEVLQAVREIKAGGGRRFTVQVAEATEARLKLGLSQADFAAMLGVSTRTLQDWEQGRRKPSGAAKALLKVAVAAPNTVRKVLAAA*