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scnpilot_expt_750_p_scaffold_526_8

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(6310..7023)

Top 3 Functional Annotations

Value Algorithm Source
Conserved membrane protein id=7720404 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 226.0
  • Bit_score: 220
  • Evalue 1.90e-54
Rhomboid family serine protease {ECO:0000313|EMBL:EPR75075.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 221.0
  • Bit_score: 201
  • Evalue 9.60e-49
conserved membrane protein, rhomboid family similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 233.0
  • Bit_score: 191
  • Evalue 2.00e-46

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Taxonomy

Leifsonia rubra → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGAGCCGGTTCGGCCGCTGGGCCGCGAGAGTCCTCCGGCCGGGCGGCAGCAGCCCGATCGTCACCTGGGCGATCGCCGGCGTCACGGTCCTGATCTGGGCGGTCCAGCTCTTCACGCCGCTGGCCGGCACCCAGATCGACCGGGTGTCGGCCGTCCTCGGCTACTTCCCGCCGTCGACGCTCGCGCACCCCTGGACGCTGGTGACCTCCGCGTTCGTGCACTCCCCGACGTCGTTCTGGCACATCCTCTTCAACATGTACGCGCTCGTCGTGGTCGGGCCGATCCTCGAGTACGCGCTCGGCCGGTGGCGCTTCCTGGTGCTCTACCTGCTCTCGGCCTTCGGCGGCTCGGTCGCGGTGCTGCTGTTCCAGCCGACCTCCTTCGTGATCGGCGCCTCGGGTGCGATCTTCGGCCTGTTCGCGGCGTTCTTCGTCGTCCAGCGCGGCCTCGGGCAGAACCCGACGCAGATCCTCATCGTCGTCGTCGCGAACCTCGTGATCGGCTTCCTGATCCCTGGCGTCGCCTGGCAGGCGCACGTCGGCGGCCTGGTGATCGGCGCGCTGGTCGGCCTGGTGCTGCTGCGCACCCGGCGCCGGGCGCAGCGCGGCGCGCAGATCGGGCTGCTGCTCGCGGTCTTCGCAGGGCTGTGCGCGCTCGTCGCGCTCGGCATGGCGATCATGCCGCCGATGCTGCGCGCGCTCGGGGGCGGCTAG
PROTEIN sequence
Length: 238
VSRFGRWAARVLRPGGSSPIVTWAIAGVTVLIWAVQLFTPLAGTQIDRVSAVLGYFPPSTLAHPWTLVTSAFVHSPTSFWHILFNMYALVVVGPILEYALGRWRFLVLYLLSAFGGSVAVLLFQPTSFVIGASGAIFGLFAAFFVVQRGLGQNPTQILIVVVANLVIGFLIPGVAWQAHVGGLVIGALVGLVLLRTRRRAQRGAQIGLLLAVFAGLCALVALGMAIMPPMLRALGGG*