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scnpilot_expt_750_p_scaffold_479_85

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 90780..91037

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] id=7722138 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 85.0
  • Bit_score: 146
  • Evalue 1.60e-32
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 141
  • Evalue 5.50e-31
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 78.0
  • Bit_score: 131
  • Evalue 8.80e-29

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Taxonomy

Leifsonia rubra → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCAGACAAGCACGTCGGCATCATCGAGCCGCCGATCGACGACCTCCTCTCGCGGGTCGACTCGAAGTACCAGCTCGTGATCTTCGCCGCCAAGCGCGCGCGGCAGATCAACAGCTACTACTCCGACCTGCAGGCGGGCAGCATGTTCGACAACGTCGGCCCGCTCGTCGACTCCTCGATCGACGACAAGCCGCTCTCGGTCGCGCTGCACGAGATCAACGAGGACAAGCTCGAGCTCAAGCGCCCCGCCGAGTAG
PROTEIN sequence
Length: 86
MADKHVGIIEPPIDDLLSRVDSKYQLVIFAAKRARQINSYYSDLQAGSMFDNVGPLVDSSIDDKPLSVALHEINEDKLELKRPAE*