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scnpilot_expt_750_p_scaffold_928_36

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 36252..37172

Top 3 Functional Annotations

Value Algorithm Source
rlu; ribosomal large subunit pseudouridine synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 464
  • Evalue 2.70e-128
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 464
  • Evalue 1.30e-127
RNA pseudouridine synthase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B42773 similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 306.0
  • Bit_score: 486
  • Evalue 2.30e-134

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGCGACGCGTAGCCTGCCCGTCCCCGACGGGCTCGACGGGCAGCGCGCGGACGCGGCGCTCGCCAAGCTGCTCGGCTTCTCCAGGACCTTCGCCGCCGAGGTGATCGAGGCCGGCGGCGCCGTGCAGGACGGCGCCCCGCTCGGCAAGTCCGACCGGCTCCGCGCCGGCGCGTGGCTCAAGGTCGACTGGACCGAGCGGGCCGAGCCGGCGATCGTCGCGGAGGTCGTCCCGGGCCTCGCGATCGTCCATGAGGACGACGCCCTGATCGTCGTCGACAAGCCGGCCGGCGTCGCGGCGCACCCCTCGCCCGGCTGGGAGGGCCCGACCGTCGTCGGCGCGCTCGCCGGGCTCGGCCGGCGCATCTCGACCTCGGGCGCCGCGGAGCGCCAGGGCGTCGTGCACCGCCTCGACCAGGGCACCAGCGGCCTCATGGTCGTCGCGAAGAGCGAGCGCGCCTACACGGAGCTCAAGCGGCAGTTCCACGACCGCGAGGTCGAGAAGGTCTACCACGCGCTCGTCCAGGGGCACCCGGACCCTCTCGCCGGCACGATCGACGCGCCGATCGGCCGGCATCCATCGGCGTCCTGGCGGTTCGCCGTCGTCGCGGGCGGCCGCCCTGCGGTGACGCACTACGAGACGCTCGAGGCGTTCCGCGCCGCGTCGCTGCTCGAGATCCGGCTGGAGACCGGCCGGACCCACCAGATCCGGGTGCACATGGCCGCGCAGCGCCACCCCTGCTGCGGCGACGCGCTGTACGGCGCGGACCCGGGCCTCGGCGCCCGGCTGGGGCTCGAGCGGCAGTGGCTGCACGCCCGCCGGCTCGGGTTCGCGCATCCCGACGACGGGCGCCGGATGGCGTTCGAGTCGCCGTACCCGCCCGACCTTCAACACGCGCTCGAGGTCATCTCGGCCGACTGA
PROTEIN sequence
Length: 307
MATRSLPVPDGLDGQRADAALAKLLGFSRTFAAEVIEAGGAVQDGAPLGKSDRLRAGAWLKVDWTERAEPAIVAEVVPGLAIVHEDDALIVVDKPAGVAAHPSPGWEGPTVVGALAGLGRRISTSGAAERQGVVHRLDQGTSGLMVVAKSERAYTELKRQFHDREVEKVYHALVQGHPDPLAGTIDAPIGRHPSASWRFAVVAGGRPAVTHYETLEAFRAASLLEIRLETGRTHQIRVHMAAQRHPCCGDALYGADPGLGARLGLERQWLHARRLGFAHPDDGRRMAFESPYPPDLQHALEVISAD*