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scnpilot_solids2_trim150_scaffold_3764

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3764_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..277
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349D875
Uncharacterized protein {ECO:0000313|EMBL:EIL91319.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_3764_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281..1057
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91320.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3764_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1054..1884
DNA (831bp) protein (277aa)
Alpha/beta superfamily hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT0_9GAMM rbh
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:EIL91321.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alpha/beta superfamily hydrolase
scnpilot_solids2_trim150_scaffold_3764_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1881..2873
DNA (993bp) protein (331aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:AGG89266.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AGG89266.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-galactose 4-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXE1_9GAMM
scnpilot_solids2_trim150_scaffold_3764_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3262..4509
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91322.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_3764_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4520..5329)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003074C75
glycosyl transferase family protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_3764_7
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5326..6321)
DNA (996bp) protein (332aa)
polysaccharide deacetylase n=1 Tax=Schlesneria paludicola RepID=UPI00029ACE47
NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97469.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_3764_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6337..7527)
DNA (1191bp) protein (397aa)
Cellulose biosynthesis protein CelD n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIE7_HALO1
Uncharacterized protein {ECO:0000313|EMBL:EYF06260.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
cellulose biosynthesis protein CelD
scnpilot_solids2_trim150_scaffold_3764_9
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7524..8588)
DNA (1065bp) protein (355aa)
Glycosyl transferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIH5_TERRK rbh
glycosyl transferase family protein rbh
Glycosyl transferase {ECO:0000313|EMBL:AFL89043.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
scnpilot_solids2_trim150_scaffold_3764_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8860..9273)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003789DAF
Uncharacterized protein {ECO:0000313|EMBL:AIF48405.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
methyltransferase type 11
scnpilot_solids2_trim150_scaffold_3764_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9829..10995)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91326.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3764_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10992..11834)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D80921
Polysaccharide deacetylase {ECO:0000313|EMBL:AIF48404.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_3764_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11914..12744
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DACD58 rbh
Glycosyl transferase {ECO:0000313|EMBL:AHX13673.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_3764_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12741..12953
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DACD58
Uncharacterized protein {ECO:0000313|EMBL:AIF48403.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_3764_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12979..13203
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E29EB5
Uncharacterized protein {ECO:0000313|EMBL:AHX16315.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
oxidoreductase domain-containing protein
Displaying 15 items

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