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scnpilot_solids2_trim150_scaffold_2746

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2746_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA6_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIM01298.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2746_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(336..731)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AGG89473.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG89473.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH1_9GAMM
scnpilot_solids2_trim150_scaffold_2746_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1115..1918
DNA (804bp) protein (268aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA3_9GAMM rbh
Folate-binding protein YgfZ {ECO:0000313|EMBL:EIM01295.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
folate-binding protein YgfZ
scnpilot_solids2_trim150_scaffold_2746_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2397..2831
DNA (435bp) protein (145aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2746_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2995..3492)
DNA (498bp) protein (166aa)
Outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH5_9GAMM
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AGG89477.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2746_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3518..4099)
DNA (582bp) protein (194aa)
Putative outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH6_9GAMM rbh
putative outer membrane lipoprotein rbh
Putative outer membrane lipoprotein {ECO:0000313|EMBL:AGG89478.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2746_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4259..5044
DNA (786bp) protein (262aa)
TatD family hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP99_9GAMM rbh
TatD family hydrolase {ECO:0000313|EMBL:EIM01291.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hydrolase, TatD family rbh
scnpilot_solids2_trim150_scaffold_2746_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5228..5752
DNA (525bp) protein (175aa)
MarR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP98_9GAMM rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:EIM01290.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_2746_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5764..7239
DNA (1476bp) protein (492aa)
NodT family RND efflux system outer membrane lipoprotein n=2 Tax=Rhodanobacter denitrificans RepID=I4WWI0_9GAMM rbh
efflux transporter, outer membrane factor lipoprotein, NodT family rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AGG89481.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2746_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7226..8434
DNA (1209bp) protein (403aa)
Efflux pump membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI1_9GAMM rbh
multidrug resistance efflux pump rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG89482.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2746_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8443..8724
DNA (282bp) protein (94aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI2_9GAMM
drug resistance transporter, EmrB/QacA subfamily
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AGG89483.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 11 items

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