ggKbase home page

scnpilot_solids2_trim150_scaffold_164

Search features with annotation key words

Displaying items 31-60 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_164_31
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32548..33669)
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AYM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18394.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_32
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33666..34244)
-----------------
DNA (579bp)
protein (193aa)
CRISPR-associated protein TIGR02710 family n=1 Tax=Roseburia sp. CAG:303 RepID=R7IS27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AJH14543.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_33
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34244..35689)
-----------------
DNA (1446bp)
protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:AJH14542.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
scnpilot_solids2_trim150_scaffold_164_34
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35689..37053)
-----------------
DNA (1365bp)
protein (455aa)
Uncharacterized protein {ECO:0000313|EMBL:AJH14541.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
scnpilot_solids2_trim150_scaffold_164_35
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37053..40979)
-----------------
DNA (3927bp)
protein (1309aa)
AAA ATPase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LS07_DESBD
Uncharacterized protein {ECO:0000313|EMBL:AJH14539.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
ATPase AAA
scnpilot_solids2_trim150_scaffold_164_36
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41712..42326
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDU6_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KEY20151.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_37
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42316..43320
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HBR1_9FLAO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ44319.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_164_38
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43324..45600
-----------------
DNA (2277bp)
protein (759aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBC9_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM37028.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_164_39
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45725..46510)
-----------------
DNA (786bp)
protein (262aa)
D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72]
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Flavobacterium sp. F52 RepID=J0S2I9_9FLAO rbh
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EJG02280.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
scnpilot_solids2_trim150_scaffold_164_40
unknown

Not on your lists

comp(46654..47439)
-----------------
DNA (786bp)
protein (262aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_41
unknown

Not on your lists

comp(47432..47905)
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_42

Not on your lists

comp(47902..48765)
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MQM6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKN24449.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_43
unknown

Not on your lists

comp(48777..48995)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_44
unknown

Not on your lists

comp(49020..50414)
-----------------
DNA (1395bp)
protein (465aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_45
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50392..50685)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:AHJ98925.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_solids2_trim150_scaffold_164_46
unknown

Not on your lists

comp(50678..51220)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000287B4B3
scnpilot_solids2_trim150_scaffold_164_47
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51217..52167)
-----------------
DNA (951bp)
protein (317aa)
Phage protein D n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KNX1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AHJ98928.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_48
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(52170..52811)
-----------------
DNA (642bp)
protein (214aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAW9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHJ98929.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_solids2_trim150_scaffold_164_49
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52823..55075)
-----------------
DNA (2253bp)
protein (751aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EBA4_9FLAO rbh
Phage tail tape measure protein, TP901 family, core region {ECO:0000313|EMBL:EGV44391.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
phage tail tape measure protein, TP901 family
scnpilot_solids2_trim150_scaffold_164_50
unknown

Not on your lists

comp(55072..55284)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_51
unknown

Not on your lists

comp(55311..55664)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_52
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(55682..56125)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PB59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHJ98932.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_53
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(56129..57334)
-----------------
DNA (1206bp)
protein (402aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 326 str. F0382 RepID=L1Q4C2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AHJ98933.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_164_54
unknown

Not on your lists

comp(57337..57750)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_55
unknown

Not on your lists

comp(57747..57977)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_56
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57986..58549)
-----------------
DNA (564bp)
protein (188aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFF13112.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
N-acetylmuramoyl-L-alanine amidase family 2 id=3804158 bin=GWF2_Bacteroidetes_33_38 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
scnpilot_solids2_trim150_scaffold_164_57
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(58569..59582)
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1M9J5_9FLAO
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_164_58
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59602..60663)
-----------------
DNA (1062bp)
protein (354aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9R5F5_9BACE
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
atp-dependent clp protease proteolytic subunit
scnpilot_solids2_trim150_scaffold_164_59
unknown

Not on your lists

60820..61260
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_164_60
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

61266..62792
-----------------
DNA (1527bp)
protein (509aa)
Uncharacterized protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KP96_9FLAO rbh
hypothetical protein rbh
Tax=RBG_13_WOR_2_44_8_curated
Displaying items 31-60 of 100 in total

View Taxonomy