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scnpilot_solids2_trim150_scaffold_191

Search features with annotation key words

Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_191_31
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40023..40244
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMI7_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KGO94028.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_191_32
unknown

Not on your lists

40349..40582
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_33
unknown

Not on your lists

comp(40595..40684)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_34
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

40727..43234
-----------------
DNA (2508bp)
protein (836aa)
magnesium-transporting P-type ATPase; K01531 Mg2+-importing ATPase [EC:3.6.3.2] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ABDB5 rbh
Tax=CSP1_2_Dadabacteria
scnpilot_solids2_trim150_scaffold_191_35
unknown

Not on your lists

43351..43536
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_36
unknown

Not on your lists

comp(43708..43854)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_37
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(43906..44697)
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366061C rbh
Rieske (2Fe-2S) oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_191_38
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44860..45021
-----------------
DNA (162bp)
protein (54aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UPT7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGD44911.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
scnpilot_solids2_trim150_scaffold_191_39
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45177..45758
-----------------
DNA (582bp)
protein (194aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTR1_DYAFD
cAMP-binding protein {ECO:0000313|EMBL:GAL81917.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
putative Crp/Fnr family transcriptional regulator
scnpilot_solids2_trim150_scaffold_191_40
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45827..46270
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003783FE5
Uncharacterized protein {ECO:0000313|EMBL:KFC58758.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_191_41
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

46531..47556
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000361076C
Uncharacterized protein {ECO:0000313|EMBL:CCH54884.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_191_42
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47830..49512
-----------------
DNA (1683bp)
protein (561aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NKP2_9SPHI rbh
Amino acid permease {ECO:0000313|EMBL:AHF14622.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family rbh
scnpilot_solids2_trim150_scaffold_191_43
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50112..50819
-----------------
DNA (708bp)
protein (236aa)
type 11 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] rbh
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Flavobacterium sp. CF136 RepID=J3C491_9FLAO rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EJL63889.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
scnpilot_solids2_trim150_scaffold_191_44
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

50864..51259
-----------------
DNA (396bp)
protein (132aa)
CHP02436-containing protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VMA9_9CYAN
CHP02436-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_191_45
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51259..51786
-----------------
DNA (528bp)
protein (176aa)
5''''-nucleotidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B79EB3
5''''-3''''-deoxyribonucleotidase {ECO:0000313|EMBL:AKA34764.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
5'(3')-deoxyribonucleotidase
scnpilot_solids2_trim150_scaffold_191_46
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51840..52730)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368B0B1 rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV99856.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_191_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

52965..56318
-----------------
DNA (3354bp)
protein (1118aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D6B7 rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU61057.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_191_48
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56825..57451
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00035FD91C
Uncharacterized protein {ECO:0000313|EMBL:ETZ19910.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_191_49
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

57611..58729
-----------------
DNA (1119bp)
protein (373aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VP34_9SPHI
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFK57681.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
anti-FecI sigma factor FecR
scnpilot_solids2_trim150_scaffold_191_50
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58839..62258
-----------------
DNA (3420bp)
protein (1140aa)
TonB-dependent receptor n=1 Tax=Niabella soli DSM 19437 RepID=H1NL90_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ22047.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
TonB-dependent receptor rbh
scnpilot_solids2_trim150_scaffold_191_51
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62290..63834
-----------------
DNA (1545bp)
protein (515aa)
RagB/SusD domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL89_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ22046.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RagB/SusD domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_191_52
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64087..65148)
-----------------
DNA (1062bp)
protein (354aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI rbh
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Crp/Fnr family transcriptional regulator
scnpilot_solids2_trim150_scaffold_191_53
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65117..67165)
-----------------
DNA (2049bp)
protein (683aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE4_9SPHI
PAS/PAC sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_191_54
GWC2_OP11_41_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

67667..68038
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS19182.1}; TaxID=1618487 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_41_7.;"
hypothetical protein id=27746 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
scnpilot_solids2_trim150_scaffold_191_55
unknown

Not on your lists

68195..68437
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_56
unknown

Not on your lists

comp(68466..68591)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_191_57

Not on your lists

68931..69149
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003746743
Marine sediment metagenome DNA, contig: S01H4_C02015 {ECO:0000313|EMBL:GAG74430.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_191_58
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69468..70406)
-----------------
DNA (939bp)
protein (313aa)
Hexose kinase, 1-phosphofructokinase family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVN9_SOLCM rbh
hexose kinase rbh
Hexose kinase, 1-phosphofructokinase family {ECO:0000313|EMBL:AFD06542.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_191_59
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70446..71294)
-----------------
DNA (849bp)
protein (283aa)
CHAD domain-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQC8_SOLCM
CHAD domain-containing protein
CHAD domain-containing protein {ECO:0000313|EMBL:AFD06544.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_191_60
unknown

Not on your lists

comp(71327..71494)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

Displaying items 31-60 of 72 in total

View Taxonomy