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scnpilot_solids2_trim150_scaffold_306

Search features with annotation key words

Displaying items 31-60 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_306_31
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36222..36821)
DNA (600bp) protein (200aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" sour
Potassium-transporting ATPase C chain n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z383_9NEIS
K+-transporting ATPase C
scnpilot_solids2_trim150_scaffold_306_32
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36831..37628)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034967A1
Uncharacterized protein {ECO:0000313|EMBL:KJV36575.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_306_33
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37638..39701)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (
Potassium-transporting ATPase B chain n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKK4_NITSI
scnpilot_solids2_trim150_scaffold_306_34
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39717..41414)
DNA (1698bp) protein (566aa)
Potassium-transporting ATPase A chain; K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] rbh
Potassium-transporting ATPase A chain n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKK3_NITSI rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_solids2_trim150_scaffold_306_35
unknown

Not on your lists

comp(41411..41515)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_306_36
unknown

Not on your lists

comp(41505..41603)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_306_37
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41725..42402)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346EB10
Uncharacterized protein {ECO:0000313|EMBL:EIL92705.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_306_38
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42605..42928)
DNA (324bp) protein (108aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter sp. 115 RepID=I4W462_9GAMM
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
chaperonin GroL
scnpilot_solids2_trim150_scaffold_306_39
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42873..44183)
DNA (1311bp) protein (437aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPV3_9GAMM
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_306_40
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44297..44590)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1 Tax=Rhodanobacter sp. 115 RepID=I4W463_9GAMM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Co-chaperonin GroES
scnpilot_solids2_trim150_scaffold_306_41
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44909..46774
DNA (1866bp) protein (622aa)
C-type cytochrome biogenesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPV6_9GAMM
thiol:disulfide interchange protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_306_42
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46908..47363
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPV8_9GAMM
scnpilot_solids2_trim150_scaffold_306_43
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47434..47895
DNA (462bp) protein (154aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:EIL89250.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EIL89250.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPV9_9GAMM
biotin carboxyl carrier protein
scnpilot_solids2_trim150_scaffold_306_44
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47911..48294
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=Q3BY68_XANC5
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_306_45
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48344..49711
DNA (1368bp) protein (456aa)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL3_9GAMM
acetyl-CoA carboxylase, biotin carboxylase subunit
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:AGG87515.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_306_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49724..50653
DNA (930bp) protein (310aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAU2_9GAMM
scnpilot_solids2_trim150_scaffold_306_47
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50735..51586
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK3_9GAMM
Protein of unknown function (DUF3426)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_306_48
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51732..52040
DNA (309bp) protein (103aa)
Fis family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0003792F8A
Factor for inversion stimulation Fis, transcriptional activator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_306_49
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52051..53661
DNA (1611bp) protein (537aa)
IMP cyclohydrolase n=1 Tax=Dyella ginsengisoli RepID=UPI000349046A rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
scnpilot_solids2_trim150_scaffold_306_50
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53746..54456
DNA (711bp) protein (237aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPW6_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:EIL89257.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_306_51
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54527..54997)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2U9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93790.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2782)
scnpilot_solids2_trim150_scaffold_306_52
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55135..57903
DNA (2769bp) protein (923aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V0_9GAMM
DNA polymerase I {ECO:0000313|EMBL:EIL93791.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_306_53
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58301..58525
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89261.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_306_54
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58604..60868
DNA (2265bp) protein (755aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-dependent helicase II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V2_9GAMM rbh
DNA/RNA helicase, superfamily I
scnpilot_solids2_trim150_scaffold_306_55
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(60973..62937)
DNA (1965bp) protein (655aa)
X-Pro dipeptidyl-peptidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L1_9GAMM
X-Pro dipeptidyl-peptidase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_306_56
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63174..65024
DNA (1851bp) protein (617aa)
Aminopeptidase N n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVM0_9GAMM
Aminopeptidase N {ECO:0000313|EMBL:EIL91261.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminopeptidase N
scnpilot_solids2_trim150_scaffold_306_57
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65135..68254)
DNA (3120bp) protein (1040aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK2_9GAMM
Oar protein {ECO:0000313|EMBL:AHX14832.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_306_58
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68559..69818)
DNA (1260bp) protein (420aa)
Putative enzyme of heme biosynthesis n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V3_9GAMM
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EIL93794.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative enzyme of heme biosynthesis
scnpilot_solids2_trim150_scaffold_306_59
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69815..70858)
DNA (1044bp) protein (348aa)
Putative enzyme of heme biosynthesis n=2 Tax=Rhodanobacter denitrificans RepID=M4NDJ5_9GAMM
putative enzyme of heme biosynthesis
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_306_60
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71079..71849)
DNA (771bp) protein (257aa)
Uroporphyrinogen-III synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V5_9GAMM
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EIL93796.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uroporphyrinogen-III synthase
Displaying items 31-60 of 84 in total

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