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scnpilot_solids2_trim150_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_539_1
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..321
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RR91_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17577.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_539_2
unknown

Not on your lists

351..1232
DNA (882bp) protein (294aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_539_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1679..2020
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCD7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01444.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2129..5704)
DNA (3576bp) protein (1192aa)
copper transporter n=1 Tax=Segetibacter koreensis RepID=UPI00035CB140 rbh
Copper transporter {ECO:0000313|EMBL:KIC89730.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acriflavin resistance protein
scnpilot_solids2_trim150_scaffold_539_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5748..6953)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D50DD rbh
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO41854.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RND family efflux transporter MFP subunit
scnpilot_solids2_trim150_scaffold_539_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6983..8338)
DNA (1356bp) protein (452aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV4_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02039.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8335..8952)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV5_NIAKG
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_539_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9076..9687
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02041.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9814..10665
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02042.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_10
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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10737..11249
DNA (513bp) protein (171aa)
Transposase n=1 Tax=planctomycete KSU-1 RepID=I3ILZ4_9PLAN
Transposase {ECO:0000313|EMBL:GAB62739.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
transposase IS200-family protein
scnpilot_solids2_trim150_scaffold_539_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11489..12559
DNA (1071bp) protein (357aa)
phosphoserine aminotransferase apoenzyme; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB96E
scnpilot_solids2_trim150_scaffold_539_12
unknown

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12644..13462
DNA (819bp) protein (273aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_539_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13647..14870
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036500A7
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14973..15977
DNA (1005bp) protein (335aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96040.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_539_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16072..17859
DNA (1788bp) protein (596aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEW02046.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEW02046.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW1_NIAKG rbh
long-chain-fatty-acid--CoA ligase rbh
scnpilot_solids2_trim150_scaffold_539_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17887..18234)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6U6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97949.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_17
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18293..19723)
DNA (1431bp) protein (477aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7R9_PEDSD rbh
two component, sigma54 specific, transcriptional regulator, Fis family; K07713 two-component system, NtrC family, response regulator HydG rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY53324.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_539_18
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19752..20693)
DNA (942bp) protein (314aa)
Putative ribonuclease BN n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FH22_FLAJ1
Ribonuclease BN {ECO:0000313|EMBL:KFF05933.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
ribonuclease BN; K07058 membrane protein
scnpilot_solids2_trim150_scaffold_539_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21298..22743)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B8EF8 rbh
PAS domain-containing protein
scnpilot_solids2_trim150_scaffold_539_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

23385..23705
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=1918317 bin=GWE2_Bacteroidetes_29_8 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_539_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

23768..24112
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUS9_HALH1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_539_22
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24141..24548
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KDN54541.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Putative uncharacterized protein id=2986114 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
scnpilot_solids2_trim150_scaffold_539_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24751..25746
DNA (996bp) protein (332aa)
Oxidoreductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH6_HALH1
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEE49417.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_539_24
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25781..27697)
DNA (1917bp) protein (639aa)
DNA ligase D n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBA4_9FLAO
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFF29920.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
ATP-dependent DNA ligase family protein
scnpilot_solids2_trim150_scaffold_539_25
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27760..28386)
DNA (627bp) protein (209aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374556F rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF08622.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
scnpilot_solids2_trim150_scaffold_539_26
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28389..29165)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003646F32 rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Ku protein; K10979 DNA end-binding protein Ku
scnpilot_solids2_trim150_scaffold_539_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29321..29962)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89329.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_539_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30081..31181
DNA (1101bp) protein (367aa)
mrp n=1 Tax=Segetibacter koreensis RepID=UPI00036AEAC9
ATP-binding protein {ECO:0000313|EMBL:KIC93273.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ParA/MinD-like ATPase; K03593 ATP-binding protein involved in chromosome partitioning
scnpilot_solids2_trim150_scaffold_539_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31268..32338)
DNA (1071bp) protein (357aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FD41B rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_539_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32389..33240
DNA (852bp) protein (284aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY8_NIAKG
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AEW00827.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 32 in total

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