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scnpilot_solids2_trim150_scaffold_553

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_553_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1161)
DNA (1161bp) protein (387aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E8_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL93639.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
scnpilot_solids2_trim150_scaffold_553_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1306..4476)
DNA (3171bp) protein (1057aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E7_9GAMM rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL93638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump rbh
scnpilot_solids2_trim150_scaffold_553_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4698..6599)
DNA (1902bp) protein (634aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E6_9GAMM rbh
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL93637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent vitamin B12 receptor
scnpilot_solids2_trim150_scaffold_553_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6980..8122)
DNA (1143bp) protein (381aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E5_9GAMM rbh
N-acetylglucosamine-6-phosphate deacetylase rbh
scnpilot_solids2_trim150_scaffold_553_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..9286)
DNA (1032bp) protein (344aa)
Glucosamine-fructose-6-phosphate aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E4_9GAMM rbh
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:EIL93635.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative phosphosugar isomerase
scnpilot_solids2_trim150_scaffold_553_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9296..10048)
DNA (753bp) protein (251aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E3_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL93634.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_553_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10271..11734
DNA (1464bp) protein (488aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E2_9GAMM rbh
glucose-6-phosphate 1-dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_553_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11853..12566
DNA (714bp) protein (238aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E1_9GAMM rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:EIL93632.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
6-phosphogluconolactonase
scnpilot_solids2_trim150_scaffold_553_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12651..14468
DNA (1818bp) protein (606aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:EIL93631.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EIL93631.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphogluconate dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E0_9GAMM rbh
6-phosphogluconate dehydratase rbh
scnpilot_solids2_trim150_scaffold_553_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14506..15249
DNA (744bp) protein (248aa)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:EIL93630.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EIL93630.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2D9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_553_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15334..16161
DNA (828bp) protein (276aa)
Redoxin domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2D8_9GAMM rbh
Redoxin domain-containing protein {ECO:0000313|EMBL:EIL93629.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thiol-disulfide isomerase-like thioredoxin
scnpilot_solids2_trim150_scaffold_553_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16161..16799
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2D7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93628.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_553_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16803..17507)
DNA (705bp) protein (235aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_553_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17561..18187)
DNA (627bp) protein (209aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG1_9GAMM rbh
GTP cyclohydrolase I
scnpilot_solids2_trim150_scaffold_553_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18343..18882
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89801.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane protein
scnpilot_solids2_trim150_scaffold_553_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18893..19240
DNA (348bp) protein (116aa)
Plastocyanin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF9_9GAMM
Plastocyanin {ECO:0000313|EMBL:EIL89800.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
plastocyanin
scnpilot_solids2_trim150_scaffold_553_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19376..19720)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89799.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_553_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19759..20352)
DNA (594bp) protein (198aa)
HAD-superfamily, subfamily IB hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF7_9GAMM rbh
HAD-superfamily, subfamily IB hydrolase {ECO:0000313|EMBL:EIL89798.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
HAD-superfamily, subfamily IB hydrolase
scnpilot_solids2_trim150_scaffold_553_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20408..21217)
DNA (810bp) protein (270aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF6_9GAMM rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:EIL89797.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protease subunit, stomatin/prohibitin
scnpilot_solids2_trim150_scaffold_553_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21388..22044)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G1U9_9CYAN
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_553_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22120..24558)
DNA (2439bp) protein (813aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF5_9GAMM rbh
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL89796.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase rbh
scnpilot_solids2_trim150_scaffold_553_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24710..25540
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA63_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87300.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_553_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25736..26398
DNA (663bp) protein (221aa)
Putative esterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF3_9GAMM rbh
Putative esterase {ECO:0000313|EMBL:EIL89794.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative esterase
scnpilot_solids2_trim150_scaffold_553_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26428..27480
DNA (1053bp) protein (351aa)
Putative sensor histidine kinase two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ4_9GAMM rbh
Putative sensor histidine kinase two component transcriptional regulator {ECO:0000313|EMBL:EIL89835.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Histidine kinase
scnpilot_solids2_trim150_scaffold_553_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27477..28184
DNA (708bp) protein (236aa)
Putative two-component system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ3_9GAMM rbh
Putative two-component system response regulator {ECO:0000313|EMBL:EIL89834.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator of the LytR/AlgR family
scnpilot_solids2_trim150_scaffold_553_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28235..28513
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89833.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_553_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28608..28820
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89832.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2945)
scnpilot_solids2_trim150_scaffold_553_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28825..29370
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89831.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_553_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29381..29812)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRI9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_553_30
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29967..30335)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Ag1 RepID=J0PCP9_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ETK17851.1}; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH4.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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