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scnpilot_solids2_trim150_scaffold_635

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_635_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3..1283)
DNA (1281bp) protein (427aa)
Helicase C-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SB92_9FIRM
DNA/RNA helicase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
scnpilot_solids2_trim150_scaffold_635_2
unknown

Not on your lists

comp(1418..2758)
DNA (1341bp) protein (447aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_3
unknown

Not on your lists

comp(2773..3201)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_4
unknown

Not on your lists

comp(3198..3383)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_5
unknown

Not on your lists

comp(3358..3657)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_6
unknown

Not on your lists

comp(3660..3863)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_7
unknown

Not on your lists

comp(3866..4048)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_8
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4045..4749)
DNA (705bp) protein (235aa)
Single-stranded DNA-binding protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6H4_OCEP5
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|RuleBase:RU000524}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
scnpilot_solids2_trim150_scaffold_635_9
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4974..6173)
DNA (1200bp) protein (400aa)
Transposase n=4 Tax=Cyanothece sp. CCY0110 RepID=A3IWI7_9CHRO rbh
Transposase {ECO:0000313|EMBL:EAZ89171.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
transposase rbh
scnpilot_solids2_trim150_scaffold_635_10
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..6630
DNA (420bp) protein (140aa)
Transposase IS200-like protein n=1 Tax=Moraxella macacae 0408225 RepID=L2F9C8_9GAMM
Transposase IS200-like protein {ECO:0000313|EMBL:ELA09058.1}; TaxID=1230338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella macacae 0408225.;"
transposase IS200-family protein; K07491 putative transposase
scnpilot_solids2_trim150_scaffold_635_11
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

6828..7763
DNA (936bp) protein (312aa)
plasmid partitioning protein ParA n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B69100
ATPase involved in plasmide/chromosome partitioning, ParA/Soj-like protein; K03496 chromosome partitioning protein
ATPase involved in plasmide/chromosome partitioning, ParA/Soj-like protein {ECO:0000313|EMBL:AFD24552.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
scnpilot_solids2_trim150_scaffold_635_12
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7750..8847
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000348DBA5
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIX84793.1}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
ParB family chromosome partitioning protein; K03497 chromosome partitioning protein, ParB family
scnpilot_solids2_trim150_scaffold_635_13
unknown

Not on your lists

8840..9220
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..10313)
DNA (996bp) protein (332aa)
Periplasmic protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEG8_9RHOB rbh
Periplasmic protein {ECO:0000313|EMBL:EJW09691.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
scnpilot_solids2_trim150_scaffold_635_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10314..11120)
DNA (807bp) protein (269aa)
ATPase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTD5_9RHOB rbh
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids2_trim150_scaffold_635_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11117..11998)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDQ6_9RHOB
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids2_trim150_scaffold_635_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12001..13416)
DNA (1416bp) protein (472aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3] rbh
Amidohydrolase family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUE3_ACHXA rbh
Amidohydrolase family protein 4 {ECO:0000313|EMBL:ADP13766.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_solids2_trim150_scaffold_635_18
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13520..14395
DNA (876bp) protein (292aa)
transcriptional regulator n=1 Tax=Rhodococcus opacus RepID=UPI00029CAFB0
HTH-type transcriptional regulator CysL {ECO:0000313|EMBL:AHK34302.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_635_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14432..14947)
DNA (516bp) protein (172aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12]
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8J2_SPHTD
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:ACZ40135.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids2_trim150_scaffold_635_20
unknown

Not on your lists

comp(14952..15467)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_21
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15748..16125
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM98196.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
scnpilot_solids2_trim150_scaffold_635_22
unknown

Not on your lists

comp(16186..16560)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_23
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(16739..17542)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0N5_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98822.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
scnpilot_solids2_trim150_scaffold_635_24
unknown

Not on your lists

18590..19375
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_25
unknown

Not on your lists

comp(19427..19630)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_26
unknown

Not on your lists

comp(19627..20217)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_27
unknown

Not on your lists

comp(20214..20375)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_28
unknown

Not on your lists

comp(20375..20836)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_29
unknown

Not on your lists

comp(20829..21329)
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_635_30
unknown

Not on your lists

comp(21322..21777)
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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