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scnpilot_solids2_trim150_scaffold_337_26

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 29383..29964

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ralstonia syzygii R24 RepID=G3A191_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 188.0
  • Bit_score: 221
  • Evalue 6.80e-55
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 188.0
  • Bit_score: 221
  • Evalue 9.50e-55
sigma factor CnrH; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 186.0
  • Bit_score: 214
  • Evalue 2.60e-53

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Taxonomy

Ralstonia syzygii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGACCCTGGAGTCAGACGACAGCACGCTGGCACGGGAGGCGTCCCGCGGCAACCAGAACGCCTATGCGCAACTGGTGCGCAGGCATCGCGCCGCCCTGAATCAGGCGGCGCGCAGTTTCGGCATCCCGGAAACCGATATCGACGACGTGGTCCAGGAATCCCTGATCGCGGCCTGGCGCCACCTGGCGGACTACGATCCGTCGCGACCGTTCCGAGCGTGGCTGTTCCGCATCGCGCTCAACAAGATGCGCGACCTGCAACGCTTCCGGAAGGTACGCCACTTCCTGTTCGCGGCCATCGGCTTCGATCGGACGGAGAGCACGGCGCTGGTCGATGCTTCGCCCTCCCCCGAACAGCATTCCGCGGCCCGTGCGGAGCTGGACCGTGTCGTCGTGACGCTGGGAAGGCTGGACTCCCACTTGCGCGAGGCGCTGGTGCTGACCGCCCTGGTGGGGATGTCCCAGACCGAGGCCGCCGACACGCTTGGTACCACCGTGAAGACCATCGAGGGCCGGGTCACCCGGGCCCGCGCGCAACTGAGCGGATTCCTAAATGAGGGGAACCTGCGGCGGGAGCCGTAG
PROTEIN sequence
Length: 194
VTLESDDSTLAREASRGNQNAYAQLVRRHRAALNQAARSFGIPETDIDDVVQESLIAAWRHLADYDPSRPFRAWLFRIALNKMRDLQRFRKVRHFLFAAIGFDRTESTALVDASPSPEQHSAARAELDRVVVTLGRLDSHLREALVLTALVGMSQTEAADTLGTTVKTIEGRVTRARAQLSGFLNEGNLRREP*