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scnpilot_solids2_trim150_scaffold_343_10

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5487..6737)

Top 3 Functional Annotations

Value Algorithm Source
Putative ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4F5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 416.0
  • Bit_score: 799
  • Evalue 1.30e-228
  • rbh
Putative ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL94346.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 416.0
  • Bit_score: 799
  • Evalue 1.80e-228
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 416.0
  • Bit_score: 670
  • Evalue 2.90e-190
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
TTGGACGCAGCGGCACAGGCGCGCCGTACCGCAGACACCGTGGCACGTCGCAGTTACGGCAAGCTGATCGCCTTCCTGGCCGCCGCCATGCGCGACGTGGCGGCGGCCGAGGATGCGCTGTCCGAAGCATTCGCCTCCGCGCTGGCGGACTGGCCGCGCAACGGCTGTCCCGCCAACCCGGAGGCATGGCTGCTCACCGTGGCCCGGCGCAAGGGCATCGATGGCCTTCGCCGCCGTCGCAGTGGCGAAGCGGTCGCGGCACAGCTGCAGCTTCTGGCGGAGATCGACGACACCGCCCCGGCGATCGCGGATGACGAGGCCATCCCCGACCAGCGCCTCGCGCTGCTGTTCGCCTGCGCCCATCCGGCGATCGACGCGGGCATCCGCGCACCGCTGATGTTGCAGGCCGTGCTGGGACTGGATGCGAAGACGATCGCCTCGGCGTTCCTCGCCTCGCCCGAGGCCATGGGCAAACGCCTGGGGCGGGCGAAGCAGAAGATCCGCGAAGCGGGCATTCCGTTCGCCATCCCCGCGCGCGACGAGCTGGCCGAACGGCTGGATGGCGTGCTGGATGCCATCTACGCCGCCTACGCGGAGGGCTGGAGCGATCCCGGTGGCACCGACCTGGTCCGTCGCGATCTCACGGCCGAAGCGCTCTTCCTCGCCGACCTGGTGGCCCGGCTGCTGCCGCAGGAACCCGAGGCGCTGGGTCTGCTGGCCTGCCTGCTGCACGCGCAGGCCAGGTGTGGTGCACGCCGCAATGCGGCGGGCGACTACGTGCCGCTGGCCGAGCAGGATGTCGCGCTGTGGGACAGCGCGATGATCGACGAGGCGGAGGCCCTGCTGCTGCGCGCCAGCACGCTGGGCCGCATCGGTCGGCATCAACTCGAAGCGGCGCTGCAATCCGCTCACGTCGAGCGCCGCCGCAGCGGGCGCACCGACTGGACGCCCGAGGTGCAGATCTACGATGCGCTGCTTGCGCTTTCCGGCTCACCGGTGGTCGCGCTCAACCGCGCGCTGGCCGTTGCCGAATGGCAAGGTCCGCGCGCCGCGCTGGATATTCTGGAGACACTCGCCGCGGGTGGACGGCTCGTGCAATACCAGCCTTACTGGGCCGCACGCGCGGCCTTGCTGGCCCGAACCCATGCCTATCTCGAAGCGCGTGACGCCTTCGACATGGCGATCGGCCTGGCCAGCGACCCCGCCGTCCGCCGTTTCCTGCAGGGACGCCAGGCCGCGCTGCCACGCTGA
PROTEIN sequence
Length: 417
LDAAAQARRTADTVARRSYGKLIAFLAAAMRDVAAAEDALSEAFASALADWPRNGCPANPEAWLLTVARRKGIDGLRRRRSGEAVAAQLQLLAEIDDTAPAIADDEAIPDQRLALLFACAHPAIDAGIRAPLMLQAVLGLDAKTIASAFLASPEAMGKRLGRAKQKIREAGIPFAIPARDELAERLDGVLDAIYAAYAEGWSDPGGTDLVRRDLTAEALFLADLVARLLPQEPEALGLLACLLHAQARCGARRNAAGDYVPLAEQDVALWDSAMIDEAEALLLRASTLGRIGRHQLEAALQSAHVERRRSGRTDWTPEVQIYDALLALSGSPVVALNRALAVAEWQGPRAALDILETLAAGGRLVQYQPYWAARAALLARTHAYLEARDAFDMAIGLASDPAVRRFLQGRQAALPR*