ggKbase home page

scnpilot_solids2_trim150_scaffold_247_3

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 2013..3950

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPR1_MARHT similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 606.0
  • Bit_score: 514
  • Evalue 1.70e-142
Strain A contig00061, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54072.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 620.0
  • Bit_score: 516
  • Evalue 4.80e-143
type II secretion system protein E; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 606.0
  • Bit_score: 514
  • Evalue 5.30e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Meiothermus ruber → Meiothermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1938
ATGGCAGTAACCACCCCCACAAAGAACCTGATCGGTTGGCTCCTCGAGCACGACCTCATCACCCCCGATCAAGCCGATGAGGCCACCCTTCACGCGGAAACCACCGACGTTCACCCCCGCGAAGCGCTCCTCACCCTCGAGCACATCAGCGACACCGACATCCAACGCGCGCTCAGAGAACAGAACATCCCCACCTGGGACCGCCTCACCAGGCCCACCCACGAAGCGCTGAACGCCATCAACGCCCGCATAGCCGCGCAACACCACTCCGTACCCCTGACCATCGACGCTGGCATCCTCACGCTCGGCATGCTCGACCCGCTCGACAACGCCCTCGTCAGGCAACTCGAGCGCAGCGCCGGCGTGCGCCTCCGCCCCCACGGCATCACGGTCGCCACCTACCGCAGCCTCACGCAGATGCTCGCCAGGCGCGCCGCCAGCCAAACCGGCGGCCGCATCATCATCGAACCCGACGCCGTGAAACTCGTCCCCAAGGAAACTGCCGAACGCTACCGGGTCATGCCACTACGCGTCCAAGACGGCGACCTCTACCTCGGAGTCACCGACGACAGCGACGTGCTGGTGATCGACAACGTCAGCATGGCCGTCGGTCGCCGCATCATCCCCGTGCAGATGGCAGAAGCCACCGTAGCCGGCCTCATCCGCAAGCATTACTCTAGCGACGAACTCACCGACCTCGTGCGCGAAGCCGGCCAGGAAGTCGCCCACCACAGCAACAACGACACCGACATCATCGAGATCGACGACGTTGACGACAACGCCGTCGTGAAGAGCATCAACACCATCCTGCGTGACGCCGTGCTGCAGGACGCCAGCGACATTCACATCGAACCCTCGCGCGAAGCCGTACGCGTCCGGTTCCGCCGCGACGGCGAACTCAGACAGTACATCGAGTTCCCCCGAAGCACCGCCGGCGCCCTCATCGCGCGCCTCAAGATCATGGGCGGCCTCAACATCGCCGAACGCCGCAGCAGCCAAGACGGCCGCATTACCTTCCGAGACGCCGGCGCCGAAACCGACATGCGCCTCTCCATCCTCCCCATCACCAACGGCGAAAAGGCCGTAATGCGAATCCTCAAGAAGGAAGAAGACATCCTCGAGATTGAAGACCTCGGCTTCACACAAGCCAACCTCGAACTCTTCCAGGACCTCATCCGCAAGCCGTACGGCATGCTCCTCGTCACCGGCCCCACCGGCAGCGGTAAGTCCTTCACCAGCTTCAGCGTCCTCAAGCGCCTCTCCAGGCCCACCATCAACATCGTCACCATCGAAGACCCCGTCGAGTACGAGGTGCGCGGCATCAACCAAGTCGCCGTCAACCGCGCCACCGGCCTCACCTTCGACCGCGCCGTCCGCTCCTTCCTGCGCCAGGACCCCGACATCATCCTCGTCGGTGAGATCCGCGACGGCGAAACCGCCAAGGCCGCCACCGAAGCCGCCATCACCGGCCACTTACTCCTCAGCACCCTGCACACCAACGACGCGCCCGGCGCCATCACCCGCCTGCGCGAAATGGGCGTCGAGTCCTACAACATCGCCGGCGGCCTCCTCGGCGTCCTCGCGCAACGCCTCGTCAGACGCATCTGCAAGCACTGCGCCGTCCCCGACGAACCCAACCCCGAGATGCTCGACACCCTCAACGAAGGCCGCATCCCCCTACCCAACCCCACCTGGCGCAGGGGAGAGGGCTGCGATGAATGCGACCACACCGGCTACCTCGGACGCGCCGCCATCCACGAGGTCCTCGCAATCGACGAGAACATGAACGACGCCATCATCCAAGGCGCCACCGCCAACGACATCCGCGACATGGCCCGCAAACGCGGCGATTTCCGCACCCTACGCGAAGACGGCCTCGTCAAAGCCGCCCAAGGCGTGACCACCCTCGACGAAGTCTTCGTCCGCACCCGGGAGTAA
PROTEIN sequence
Length: 646
MAVTTPTKNLIGWLLEHDLITPDQADEATLHAETTDVHPREALLTLEHISDTDIQRALREQNIPTWDRLTRPTHEALNAINARIAAQHHSVPLTIDAGILTLGMLDPLDNALVRQLERSAGVRLRPHGITVATYRSLTQMLARRAASQTGGRIIIEPDAVKLVPKETAERYRVMPLRVQDGDLYLGVTDDSDVLVIDNVSMAVGRRIIPVQMAEATVAGLIRKHYSSDELTDLVREAGQEVAHHSNNDTDIIEIDDVDDNAVVKSINTILRDAVLQDASDIHIEPSREAVRVRFRRDGELRQYIEFPRSTAGALIARLKIMGGLNIAERRSSQDGRITFRDAGAETDMRLSILPITNGEKAVMRILKKEEDILEIEDLGFTQANLELFQDLIRKPYGMLLVTGPTGSGKSFTSFSVLKRLSRPTINIVTIEDPVEYEVRGINQVAVNRATGLTFDRAVRSFLRQDPDIILVGEIRDGETAKAATEAAITGHLLLSTLHTNDAPGAITRLREMGVESYNIAGGLLGVLAQRLVRRICKHCAVPDEPNPEMLDTLNEGRIPLPNPTWRRGEGCDECDHTGYLGRAAIHEVLAIDENMNDAIIQGATANDIRDMARKRGDFRTLREDGLVKAAQGVTTLDEVFVRTRE*