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scnpilot_solids2_trim150_scaffold_124_36

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 29964..33275

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer protein TraA n=1 Tax=Rhizobium radiobacter RepID=K7X7S1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 999.99
  • Bit_score: 1686
  • Evalue 0.0
  • rbh
Dtr system oriT relaxase {ECO:0000313|EMBL:KEA03061.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 999.99
  • Bit_score: 1690
  • Evalue 0.0
traA; Dtr system oriT relaxase similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 999.99
  • Bit_score: 1661
  • Evalue 0.0
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3312
GTGCCCGTCCCTCATTTCTCGGTCGGCATCGTCAGCCGCGGCGAAGGCCGCAGCGCCGTGCTGTCGGCCGCCTACCGGCATTGCGCGAAAATGGACTACGACCGGGAGGCGCGCACGGTCGATTATTCGGCCAAGCAGGGCCTCCTGCACGAGGAATTCCTGCTGCCGGCCGACGCGCCGCGATGGGCGCGGCTGCTGATCGCCGACCGCTCGGTGGCGGGCGCGGCCGGAGCCTTCTGGAACAGGATAGAGACCTTCGAGAAACGCTCGGACGCCCAGCTCGCCAAGGATGTCACCATAGCATTGCCGATCGAGCTTTCGGCCGACCGGAACATCGCGCTGGTGCGGGATTTCGTCGAGAGCCACATCCTGTCGAAAGGCATGGTCGCCGACTGGGTCTACCATGACAATCCCGGCAATCCGCATGTACATCTCATGATGACCTTGCGGCCGCTGACCGAAGACGGGTTCGGGCAGAAGAAGGTTTCGGTTCTTCGCCCCGACGGGCAGCCGCTGCGCAACGACGCCGGCAAAATCGTCTACGAACTTTGGGCCGGCGGCGCGGCGGAGTTTGGCGCGTTTCGCGACGGCTGGTTCGCCTGCCAGAACCGTCATCTGGCGCTTGCCGGTCTCGACATCCGCGTCGATGGTCGTTCCTACGAGAAGCAGGGGATCGAGCTTCAACCGACCATCCATCTCGGCGTCGGAACCAAGGCGATCGAACGCAAGGCGGCGGGCAAGAAATGGTCGCCACGGCTTGAACGCGTCGCATTGCAGGAAGAGCGCCGCGTCGAGAATGCGCGCCGTATCGAGCGCCGGCCGGAGATCGTGCTGGACATCATCACCCGCGAGAAAAGCGTCTTCGACGAGCGCGACATCGCCAAAATCCTGCACCGCTATGTCGATGACGCAACGCTGTTCCGGCAGCTGATGGCGCGCATCCTGCAGAGCCCCGCCGTGCTGCGGCTGGAGCGCGAGACGGTCGAGTTCGCGAGCGGCGCCCGCGTCCCGTCGAAATACACGACGCGCGAGCTGATCCGGCTCGAAGCCGAAATGGCGAGCCGCGCCATCTGGCTTGCCGGACGCTCCTCGCACGGCGTTCGTCAGCCAGTGCTCGCCGCCACTTTCGCGCGCCACGGAAACCTGTCGCAGGGTCAGAAGACCGCGATTGAGCATGTCGCCGCTCCAGCGCGGATCGCGGCGGTGGTTGGCCGCGCCGGCGCCGGCAAGACCACGATGATGAAGGCGGCAGCCGAGGCTTGGGAACTGGCCGGATACCGTGTCGTCGGCGCCGCCCTCGCCGGCAAGGCAGCCGAAGGGCTGGAGCAGGAAGCAGGCATCGTCTCGCGCACCCTGGCCTCATGGGAGCTGCGCTGGAACGAAGGTCGCGACCTGGTCGACGGCAAGACTGTCTTCGTCCTCGACGAGGCCGGCATGGTGTCGTCCCGTCAGATGGCGTTCTTTGTCGAGACGGTCACCAAAGCCGGCGCGAAACTCGTCCTGATCGGCGATCCGGACCAACTCCAGCCGATCGAGGCGGGCGCGGCGTTCCGCGCCATCGCCGATCGGATCGGCTATGCCGAACTCGATACCATCTATCGCCAGCGCGAACAGTGGATGCGCGAGGCCTCGCTCGACCTGGCGCGCGGTCGCATCGCCGAGGCGGTTGGCGCCTATCAGGCGAAGGGCAAGCTTCTGGGCTCTGACACCAAGGCTGAGGCGGTCGCAAAGCTGATCGCCGATTGGGACCGCGACTACGATCCGGCGAAGACCATGTTGATGCTGGCGCATCTGCGCCGCGACGTCCGCATGTTGAACGACATGGCGCGCGCGAAACTGGTCGAGCGCGGCATCGTCGGCGAGGGTTTTGCGTTCCAGACCGAGGAGGGTGAGCGAAAATTCGCCACCGGCGACCAGATCGTGTTTTTGAAGAACGAAGGTTCGCTCGGCATCAAGAACGGCATGATCGGCAAGGTGGTGGAAGCTGCGCCTGGCCGCATTGTCGTCGAGGTAGGAACGGACGGAAAGCGCCGCCAGGTCACGGTCGAAAGCCGGTTCTACCGCAACATCGACCATGGCTACGCCACCACGATCCACAAGAGCCAGGGCGCCACTGTCGACCGGGTGAAGGTTCTTGCTTCGCTGTCGCTGGACCGGCATCTGACTTATGTCGCCATGACCCGTCACCGCGAGGACCTCGCCGTCTATTACGGCCAACGCTCCTTCGCCAAAGCGGGCGGGCTCGTTGCGATCCTGTCGCGCAAGAACGCCAAGGAGACGACGCTCGATTACGAGCGGGCGCCGCTCTATCGGCAGGCCCTGCGGTTTGCCGAGGCGCGCGGCCTGCATCTCGTCAACGTCGCCAGGACGCTCGTTCGGGATCGGCTGCAATTGCTGCTGCGGCAGAAGCAAAAACTCGTCGATCTCGGTGCGCGTCTTGCAACGATCGGGGCCAGGCTCGGCCTCGTTCGCGGCGGCGACAGGCAATCGATCCCGAACACCATCACGGAGGCAAAACCCATGGTCGCCGGCGTCACTATTTTCCCGAACTCGATCGAACAGGCCGTCGAGGACAGGCTCGGCGCCGATCCCGGCTTGAAGAAGCGGTGGGAAGAAGTGTCGACGCGGTTTCATCTTGTCTACGCGCAACCTGAGGCCGCCTTCCAGGCAGTCGGCGTCGAAGCGATGCTGAAGGATGCCGGTGTCGCGGAAACCACGCTTGCCAAGCTTGTCGACCAACCGGAAATCTTCGGCGCGCTCAAGGGCAAAACGGGCATCTTCGCCAGCCGCGCCGACAGAGAGCATCGCGTCAGGGCCGAGCGCAATGTGGCGGCGCTGGCCGAGAGCCTGAAGGACTATGCGCGCATGCGCGCCGATGCCGAACGCAAGTATGAGGCGCAGGAGCGCGCCGCCCGCCTCAAGGTTGCGTTAAACATTCCGGCGCTGTCGTCGAATGCGAAACAGATGCTGGAACGGGTGCGTGACGCGATCGACCGCAACGACCTGCCGGCGGCGCTCGAGTTCGCTCTGGCCGACAGAATGGTGAAGGCCGAACTGGAAGGTTTCGCCAAGGCCGTCTCGGAACGTTTCGGCGAACGGACATTTCTCTCGCTCGCCGCAAGGGACTCGGAAGGGTCAGTCTTCAAATCCGTCACCGCCGACATGGCGCCGACGCGGAAAGCGGAAGTGCAAGCGGCATGGAATCTGATGCGCACGGTCCAGCAATTGTCGGCGCATGAGCGCACCACCGAGGCGCTGAAACAATCCGAGACGTTGCGCCAGAGCCAAAGCCAGGGCCTCAGCCTCAAATGA
PROTEIN sequence
Length: 1104
VPVPHFSVGIVSRGEGRSAVLSAAYRHCAKMDYDREARTVDYSAKQGLLHEEFLLPADAPRWARLLIADRSVAGAAGAFWNRIETFEKRSDAQLAKDVTIALPIELSADRNIALVRDFVESHILSKGMVADWVYHDNPGNPHVHLMMTLRPLTEDGFGQKKVSVLRPDGQPLRNDAGKIVYELWAGGAAEFGAFRDGWFACQNRHLALAGLDIRVDGRSYEKQGIELQPTIHLGVGTKAIERKAAGKKWSPRLERVALQEERRVENARRIERRPEIVLDIITREKSVFDERDIAKILHRYVDDATLFRQLMARILQSPAVLRLERETVEFASGARVPSKYTTRELIRLEAEMASRAIWLAGRSSHGVRQPVLAATFARHGNLSQGQKTAIEHVAAPARIAAVVGRAGAGKTTMMKAAAEAWELAGYRVVGAALAGKAAEGLEQEAGIVSRTLASWELRWNEGRDLVDGKTVFVLDEAGMVSSRQMAFFVETVTKAGAKLVLIGDPDQLQPIEAGAAFRAIADRIGYAELDTIYRQREQWMREASLDLARGRIAEAVGAYQAKGKLLGSDTKAEAVAKLIADWDRDYDPAKTMLMLAHLRRDVRMLNDMARAKLVERGIVGEGFAFQTEEGERKFATGDQIVFLKNEGSLGIKNGMIGKVVEAAPGRIVVEVGTDGKRRQVTVESRFYRNIDHGYATTIHKSQGATVDRVKVLASLSLDRHLTYVAMTRHREDLAVYYGQRSFAKAGGLVAILSRKNAKETTLDYERAPLYRQALRFAEARGLHLVNVARTLVRDRLQLLLRQKQKLVDLGARLATIGARLGLVRGGDRQSIPNTITEAKPMVAGVTIFPNSIEQAVEDRLGADPGLKKRWEEVSTRFHLVYAQPEAAFQAVGVEAMLKDAGVAETTLAKLVDQPEIFGALKGKTGIFASRADREHRVRAERNVAALAESLKDYARMRADAERKYEAQERAARLKVALNIPALSSNAKQMLERVRDAIDRNDLPAALEFALADRMVKAELEGFAKAVSERFGERTFLSLAARDSEGSVFKSVTADMAPTRKAEVQAAWNLMRTVQQLSAHERTTEALKQSETLRQSQSQGLSLK*