ggKbase home page

scnpilot_solids2_trim150_scaffold_377_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 13595..14470

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 291.0
  • Bit_score: 437
  • Evalue 9.10e-120
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 289.0
  • Bit_score: 441
  • Evalue 8.80e-121
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 291.0
  • Bit_score: 437
  • Evalue 2.90e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGTATGCGTCAATTAAAAATTTCAAAATCTATTACTAACCGGGAAAGTGAAAGCCTGGAAAAATATTTACAGGAAATCGGGCGGGTAGAATTGATCACTCCTGAAGAAGAAGTAAAGTTAGCGCGCTTAATAAAGCAAGGAGATCAAAAAGCGCTGGATAAGCTTACAAAGGCCAACCTTCGTTTTGTGGTTTCCGTTGCCAAACAATATCAAAACCAGGGCCTCACGTTGCCCGATCTCATCAATGAAGGGAATCTCGGATTGATAAAGGCAGCCCAGCGATTTGATGAGACGCGGGGCTTTAAATTTATTTCTTATGGCGTATGGTGGATTCGCCAAAGTATCATGCAGGCGCTGGCAGAGCAATCCCGCATTGTAAGATTACCATTAAATAAAGTAGGGCTGACCAATAGGATCAGCAGGGCCTATTCTCAACTGGAACAGGAATATGAACGCACTCCTACCGCTGAAGAATTAGCCAATTACCTTGATGTGGAACTTGAGGAAGTAGCTGCAACAATGAGTGTTGCCGCAAGGCATGTAAGTATGGACTCGCCATTGAGCGATGGGGAAGAAAGTACTCTTATAGATGTGCTCGCAAATGAAAATGCCGATAGCGCAGACAAACAAATAATATTTAAAGATTCTTTGAGGCAGGAAGTACAGCGTTCCCTGAGCTTGCTTACCCCGCGTCAAAAAGAAGTGATCTGTTCCCTTTATGGCATAGATGTAGATGAGCCGGTGAGCCTTGAGGATCTTGGATCAAGATATGGGCTTACAAGAGAAAGAATAAGACAAATAAAAGATAAGGCGCTGGAAAAACTAAGAACAGTTTCAGGAGCTAATCTTCTAAGAGAATATATGGGTGTATAA
PROTEIN sequence
Length: 292
MSMRQLKISKSITNRESESLEKYLQEIGRVELITPEEEVKLARLIKQGDQKALDKLTKANLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYGVWWIRQSIMQALAEQSRIVRLPLNKVGLTNRISRAYSQLEQEYERTPTAEELANYLDVELEEVAATMSVAARHVSMDSPLSDGEESTLIDVLANENADSADKQIIFKDSLRQEVQRSLSLLTPRQKEVICSLYGIDVDEPVSLEDLGSRYGLTRERIRQIKDKALEKLRTVSGANLLREYMGV*