ggKbase home page

scnpilot_solids2_trim150_scaffold_577_17

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 18079..19302

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDJ3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 399.0
  • Bit_score: 281
  • Evalue 1.20e-72
Putative anti-sigma factor {ECO:0000313|EMBL:GAO43013.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 409.0
  • Bit_score: 294
  • Evalue 2.40e-76
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 399.0
  • Bit_score: 281
  • Evalue 3.70e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1224
TTGACTGCTAAAAAAACCATTTATTTTATTTCTATGACGAATGAATCTTTCAGAGAACTGCTTGGCCGCTATATGCTGGGCACACTTACAAAAGAAGAGAAAAGACAATTCTCCCAGGCGCTGGAGCAGCCTGAACTTACGTCGGAACTTGAAAAAGTGCTGGAAGATACTTTTATGAATGACACATTTGAAGGTAATGACAACCCTGCAAGACGCAAGCGTATCTATGAATTGCTGCAACAAAAAATAAAATCCTTTAAACAACCTTACAGGCAGGATCCACCATCAAAAGTATTCTCATTAAAAAAATTAGCAGCCGCTGCGGCAATACTATTTGCCATTGCAGGCGCCGTATATTTTTTAGCATCACAAAAGCCTGATCCGGAAATGGCTGTATCTGTTAAAGAAAATAAGACCACTAAAGAAATGGATGTACTACCGGGACACAAAGGCGCCACACTCAGCTTATCTGATGGAACTACTATTGTATTAGACAGTGTACAAAACGGCACTTTGGCAATGCAGGGAAACATACAGGTAGTAAAAGAAAACGGGCAGATTTTATATAGAGGAAAAAATGGTGAAGTATTGTATAATAACATCAGTACCGACAGAGGCCGGCAATGGTCAGTCGTTTTGCCTGATAGCTCCAGGGTATGGCTGAATGCAGAATCATCTATACGCTATCCGCTCACCTTTACAGGAAAAGAAAGAGTAGTGGACATAACCGGAGAAGCCTATTTTGAAGTAGAGCCTGATAAAAAATTACCTTTTAAAGTAAGGGCTGGAAATAAGGAAATAGTAGTATTAGGAACTCATTTTAATGTCAACTCCTATAAAGATGAGCCATCCATGCGGGCTACTTTGATCGAAGGATTGATAAGCATAAGCAGCGGCAGCGAAAAGAAAATAGTACATCCCGGGCAGGAAGCTTCTATATTAAATAACACTACAGATATAAAGATCACAAGCGTTGATGTACAAAATGCAATAGCATGGAAAAACGGGTATTTTAGTTTTCACAATGCTGATTTAAAAACTGTAATGAGGCAATTGACAAGGTGGTATGATATCAATGTGATTTATGAAAAGCAGGCGCCTAATCTGGAGTTTGAAGGCGCTATAGATCAGTCATTAAAGCTATCAGCAGTACTAAGAATACTGGAAAAAACAGGAGTTCATTTTAGAATTGAAGAAAATAAAAAATTAATCATTTTGCCTTAA
PROTEIN sequence
Length: 408
LTAKKTIYFISMTNESFRELLGRYMLGTLTKEEKRQFSQALEQPELTSELEKVLEDTFMNDTFEGNDNPARRKRIYELLQQKIKSFKQPYRQDPPSKVFSLKKLAAAAAILFAIAGAVYFLASQKPDPEMAVSVKENKTTKEMDVLPGHKGATLSLSDGTTIVLDSVQNGTLAMQGNIQVVKENGQILYRGKNGEVLYNNISTDRGRQWSVVLPDSSRVWLNAESSIRYPLTFTGKERVVDITGEAYFEVEPDKKLPFKVRAGNKEIVVLGTHFNVNSYKDEPSMRATLIEGLISISSGSEKKIVHPGQEASILNNTTDIKITSVDVQNAIAWKNGYFSFHNADLKTVMRQLTRWYDINVIYEKQAPNLEFEGAIDQSLKLSAVLRILEKTGVHFRIEENKKLIILP*