ggKbase home page

scnpilot_solids2_trim150_scaffold_1294_4

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(3054..3425)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QMR3_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 123.0
  • Bit_score: 238
  • Evalue 2.60e-60
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 123.0
  • Bit_score: 238
  • Evalue 8.30e-61
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 123.0
  • Bit_score: 238
  • Evalue 3.70e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGACCATCAGCCAGCTGATCCGCAAGTCGCGGGAACAGTCAGTCTACCGGGAGAAGTCTCGCCATCTGGAGGCTTGCCCCCAGAAGCGCGGCGTTTGCACCCGCGTCTATACGACGACCCCGAAGAAGCCGAACTCGGCGCTGCGCAAGGTCGCCAAGGTGCGCCTGACGAACGGTTACGAGGTCATCGGCTATATCCCGGGCGAGGGGCATAACCTGCAGGAGCATTCGGTGGTCATGGTGCGCGGTGGCCGCGTCAAGGATCTGCCGGGCGTGCGCTACCACATCCTGCGCGGCGTGCTCGATACGCAGGGCGTCAAGGACCGCAAGCAGCGCCGTTCCAAATACGGCGCCAAGCGTCCGAAGTAA
PROTEIN sequence
Length: 124
MPTISQLIRKSREQSVYREKSRHLEACPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGYEVIGYIPGEGHNLQEHSVVMVRGGRVKDLPGVRYHILRGVLDTQGVKDRKQRRSKYGAKRPK*