ggKbase home page
Advanced Search
Search Help

scnpilot_solids2_trim150_scaffold_1294_6

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(8244..12392)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 999.99
  • Bit_score: 2340
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 999.99
  • Bit_score: 2340
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F69FB8 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 999.99
  • Bit_score: 2344
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4149
ATGGCGCAGACCGGATTGGATCAAACCAATGTGGCGCAGACGTTCACGGGCCGGAAGCGGGTTCGCAAGTTTTTCGGCAAGATCCGGGAAGCTGCGGAGATGCCTAACCTCATCGAGGTGCAGAAGGCATCCTACGACCAGTTCCTGATGGTCGAGGAGCCGAAGGGCGGCCGCCCGGACGAGGGCCTGAACTCCGTGTTCAAGTCGGTGTTCCCGATCGGCGATTTCGCCGGCACCTCGCTGCTGGAATTCGTCAAATACGAGTTCGAGCCGCCGAAATACGATGTGGACGAGTGCCGTCAGCGCGGCATGACCTTCGCCGCGCCGCTCAAGGTGACGCTGCGCCTGATCGTGTTCGATGTGGATATCGATACCGGCGCCAAGTCGGTCAAGGATATCAAGGAGCAGGACGTCTACATGGGCGACATGCCGCTCATGACGATGAACGGCACCTTCATCGTCAACGGCACCGAGCGTGTCATCGTCTCGCAGATGCACCGTTCGCCGGGCGTGTTCTTCGATCACGACAAGGGCAAGACGCACTCCTCGGGCAAGCTGCTGTTTGCTGCCCGTATCATCCCGTATCGCGGTTCCTGGCTCGACATCGAGTTCGACGCCAAGGACATCGTGCACGCCCGTATCGATCGCAAGCGCAAGATTCCGGTGACGTCGCTGCTGTTCGCGCTCGGGCTCGACAGCGAGGAAATCCTCAAGACCTTCTACAAGACCGTTCCCGTCACGCAGGACAAGAACGGCTGGCGCATGCCCTATGACGCCGAGCGCTTCAAGGGCTACAAGGCGTCGATCGACATGATCGATGCCGATACCGGCGCCGTCGTGGTCGAGGCCGGCCGCAAGCTGGTGGTGCGTTCGGCGCGCCAGCTCGCCGAGCGCGGTCTGAAGGCGTTGCGCATCACCAACGAGGACCTGATCGGCCAGTATATCGCCGAGGATCTGGTCAACATGCAGACCGGCGAGATCTACGCCGAGGCGGGTGACGAGATCAGCGAGAAGCTGCTGGCCGGCTTCGAGGAGGCTGGCATCACCGAGTTGCCGCTGCTCGACATCGATCACGTCAATATCGGCCCGTATATCCGCAACACGCTTGCCGTCGACAAGAACTCGACGCGCGAGGAAGCGCTGTTCGACATCTACCGCGTGATGCGTCCGGGCGAGCCGCCGACGGTCGAGACGGCCGAGGCGATGTTCCAGTCGCTGTTCTTCGACAGCGAGCGCTACGACCTGTCGGCCGTTGGCCGCGTCAAGATGAACATGCGCCTCGATCTCAAGGCCGAGGACACCGTGCGCGTGCTGCGGCGCGAGGACATCCTCGCCGTCGTCGGCGAGCTGCTCGAACTGCGCGACGGGCGCGGGGAGGTCGATGATATCGACCATCTCGGCAACCGGCGCGTGCGCTCGGTCGGCGAGCTGATGGAAAACCAGTATCGCCTCGGCCTGCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCGAGCGTCGACATCGATACCGTGATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCAGCCGCGGTGCGCGAGTTCTTCGGTTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTGTCCGAGATCACGCATAAGCGTCGTCTCTCGGCGCTTGGACCGGGCGGCCTGACGCGCGAGCGCGCCGGGTTCGAGGTGCGCGACGTGCATCCGACGCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAATATCGGCCTTATCAACAGCTTGGCGACCTTCGCTCGCGTGAATAAATACGGCTTCATCGAAAGCCCGTATCGCAAGGTCAATGACGGCCATGTCACCGATGACGTCGCCTATCTCTCGGCGATGGAAGAGCAGAAGTACTATGTCGCGCAGGCGTCCTCGCCGATGGACAAGGCCGGCAAGCTCACCGACGAACTGATCGTGTGCCGCCATGCCGGCGACGTGCTGGTGGTGCCGGTCGAGCGCGTCGACTTCATGGACGTGTCGCCGAAGCAACTTGTTTCGGTCGCGGCCGCCCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTGGTGCGCGCCGATGCGCCGTTCGTCGGCACCGGCATGGAAGCGGTCGTCGCCCGCGATTCGGGCGCTGCGATCGCTGCGCGCCGTACCGGTTATATCGACCAGGTCGATGCGACCCGTATCGTCGTGCGCGCCACGGAAGAGCTCAATGCCGGCAAGGCCGGTGTCGATATCTACCGCCTGATGAAGTTCCAGCGCTCGAACCAGTCGACCTGCATCAACCAGCGTCCGCTGGTGAAGGTCGGTGATTTCGTGCGCAAGGGCGACATCATCGCCGACGGTCCCTCGACCGATCTCGGCGATCTGGCGCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAATTTCGAGGATTCGATCCTCCTGTCCGAGAATATCTCGAAGGAGGACGTGTTCACCTCCATCCACATCGAGGAATTCGAGGTGATGGCCCGCGACACCAAGCTCGGGCCGGAGGAGATCACGCGCGACATTCCGAACGTGTCGGAAGAGGCGCTGAAGAACCTCGACGAGGCCGGTATCGTCTATATCGGCGCGGAAGTGATGGCCGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTCTTGCGCGCCATTTTCGGCGAGAAGGCTTCCGACGTGCGCGACACCTCGTTGCGCGTGCCGCCGGGCGTGCAGGGCACGATCGTGGAAGTGCGCGTGTTCAACCGGCACGGCGTCGACAAGGACGAGCGCGCCCAGGCGATCGAGCGCGAGGAAATCGAGCAGCTCGCCAAGGACCGCGACGACGAACTCGCCATCCTCGACCGCAACACCTATGGCCGCCTGTCGCAGCTTCTGATCGGCAAGACCGGCATTGCCGGGCCGAAGTCGTTCAAGAAGGACAACGAGATCACGCGCGAGGCGCTCGACGCTTCGCCGCGCTCGCAGTGGTGGCAGTATGCCGTCGCCGACGATCACCTGATGGGTGAGGTCGAGGCGATGCGCAAACAGTATGACGAGGCCAAGAAGCTGCTCGAGCAGCGCTTCATGGACAAGGTCGAGAAGCTGCAGCGCGGCGACGAACTGCCGCCCGGCGTGATGAAGATGGTCAAGGTGTTCGTGGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCGTCTCGAAGATCGTGCCACAGGAGGACATGCCGTTCCTGGAGGACGGCACGCCAGTCGATATCGTGCTCAACCCGCTCGGCGTGCCGAGCCGGATGAATGTCGGCCAGATCCTCGAGACGCATCTCGGCTGGGCCTGTGCCGGCCTCGGCCGGCAGGTCAACGAAGCTGTCACGGCCTATCTCAAGAGCCAGGACATCCAGCCGTTGAAGGCCAAGCTCGACGACATCTACGGCGAGAACGACGCCATCAAGAGCATGGACGCCAACCAGCTTGTCGAACTCGGCCGCAACCTCAAGCGCGGCGTGCCGATCGCGACACCGGTGTTCGACGGCGCCAAGGAAGCCGACATCGAGACCTTCCTGAAGAAGGCGGGGCTGTCGATTTCCGGGCAGTCGACGCTCTATGACGGGCGCACGGGCGATGCTTTCGACCGGCAGGTGACAGTCGGCTACATCTACATGCTGAAGCTGCACCATCTGGTCGACGACAAGATCCATGCCCGCTCGATCGGCCCTTATTCGCTGGTCACCCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGCCAACGCTTCGGCGAGATGGAGGTCTGGGCGCTCGAGGCCTATGGCGCCGCCTACACGCTGCAGGAGATGCTGACGGTCAAGTCCGATGACGTGGCCGGCCGCACCAAGACCTACGAGTCGATCGTGCGCGGCGAGGACAATTTCGAGAGCGGCATCCCCGAGAGCTTCAACGTGCTCGTCAAGGAGATGCGTTCGCTCGGCCTCAATGTCGAACTGGCCATGGACAAGCCGGCGGACGATCTGCCGCCGGCCGAGGCGGCCGAGTAG
PROTEIN sequence
Length: 1383
MAQTGLDQTNVAQTFTGRKRVRKFFGKIREAAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLNSVFKSVFPIGDFAGTSLLEFVKYEFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDVDIDTGAKSVKDIKEQDVYMGDMPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEFDAKDIVHARIDRKRKIPVTSLLFALGLDSEEILKTFYKTVPVTQDKNGWRMPYDAERFKGYKASIDMIDADTGAVVVEAGRKLVVRSARQLAERGLKALRITNEDLIGQYIAEDLVNMQTGEIYAEAGDEISEKLLAGFEEAGITELPLLDIDHVNIGPYIRNTLAVDKNSTREEALFDIYRVMRPGEPPTVETAEAMFQSLFFDSERYDLSAVGRVKMNMRLDLKAEDTVRVLRREDILAVVGELLELRDGRGEVDDIDHLGNRRVRSVGELMENQYRLGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKVNDGHVTDDVAYLSAMEEQKYYVAQASSPMDKAGKLTDELIVCRHAGDVLVVPVERVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAVVARDSGAAIAARRTGYIDQVDATRIVVRATEELNAGKAGVDIYRLMKFQRSNQSTCINQRPLVKVGDFVRKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNFEDSILLSENISKEDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVMAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERAQAIEREEIEQLAKDRDDELAILDRNTYGRLSQLLIGKTGIAGPKSFKKDNEITREALDASPRSQWWQYAVADDHLMGEVEAMRKQYDEAKKLLEQRFMDKVEKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSKIVPQEDMPFLEDGTPVDIVLNPLGVPSRMNVGQILETHLGWACAGLGRQVNEAVTAYLKSQDIQPLKAKLDDIYGENDAIKSMDANQLVELGRNLKRGVPIATPVFDGAKEADIETFLKKAGLSISGQSTLYDGRTGDAFDRQVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKTYESIVRGEDNFESGIPESFNVLVKEMRSLGLNVELAMDKPADDLPPAEAAE*