ggKbase home page

scnpilot_solids2_trim150_scaffold_506_16

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(12265..12645)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 81.0
  • Bit_score: 163
  • Evalue 1.10e-37
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EIL90828.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 81.0
  • Bit_score: 163
  • Evalue 1.50e-37
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 128.0
  • Bit_score: 123
  • Evalue 6.80e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
GTGCGCACGACGCCGCTTTACAACATTCGCGCGGGCGTGGGTTATCTGCTGCTGAAACTCGCAGGGTTCGAGGTGAAGGACGTGCTCGACAAGGACAACACGATCCACCAGCTGACCGTGAAGGCTGGCGACAGCTTCGACAAGCTGGCGCATGCGCACGGAAGCACGGTTGCGGTCATGCAGGCATGGAACCCCGGGGTGCCCGGGCTGCACCCAGGCCAGGTTCTGAAATATCAAAAGGCCTCCCACCAGACGGTCGCAGGATGGCGGGCTGCCACCACGGCAAACGTCGCCATGTATGACGACGCGGCCTGCGCGAAAAAGCTGGGTTTCGCCCTGTCGGTCATCCAGCAGGGGAACGTTCCGCCATGCCGGCCGTGA
PROTEIN sequence
Length: 127
VRTTPLYNIRAGVGYLLLKLAGFEVKDVLDKDNTIHQLTVKAGDSFDKLAHAHGSTVAVMQAWNPGVPGLHPGQVLKYQKASHQTVAGWRAATTANVAMYDDAACAKKLGFALSVIQQGNVPPCRP*