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scnpilot_solids2_trim150_scaffold_713_4

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5767..6357)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ24_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 192.0
  • Bit_score: 155
  • Evalue 7.90e-35
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ24609.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 192.0
  • Bit_score: 155
  • Evalue 1.10e-34
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 178.0
  • Bit_score: 141
  • Evalue 3.70e-31

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGCCCGTCCATGATCTATATGATATGAAAGAATGCTTTCAAAGCCTTGCAAGAGGTGATGCGAGTGCATTTGAGGCCATCTTTGAGTTTTATAAAAAAAGAGTGTTTGGCGTAGCGCTCAAAATGCTGAAGTCTGAAACAGAAGCGGAAGAGATTGTGCAGGATGTATTCCTTTCTATCTGGCTGGCTAAAGCAAAGCTAAGTCACATCAATGATCCGGAGGCTTATCTTTTCACTATTACTTACAATACCATTTATGCCCGCTTAAAAAAAGCATCCCGTAACCAGGAACTTTTAGATACGATCATACATCATCTTGCCCAAATACAAAATACAACAGACGAAACTATTGCTGCCCGTGAAGCCGGCAAATTGATCAACGAGGCCATACAGCAGCTTCCTCCGCAGCAGCGGGTTGTTTACGAATTAAGTAAGCAGGAAGGATTAAGCTATGATGAGATCGCAGAGCGTATGCATCTCTCAAAGAATACAGTGCGGAACCATCTTGCAGAAGCCATGAAAACGATCCGTACTTTTTTGAAAAAAGCGGCTATGCTGTTTATGTCGCTGATGGTATTGTTTATTGACTGA
PROTEIN sequence
Length: 197
MPVHDLYDMKECFQSLARGDASAFEAIFEFYKKRVFGVALKMLKSETEAEEIVQDVFLSIWLAKAKLSHINDPEAYLFTITYNTIYARLKKASRNQELLDTIIHHLAQIQNTTDETIAAREAGKLINEAIQQLPPQQRVVYELSKQEGLSYDEIAERMHLSKNTVRNHLAEAMKTIRTFLKKAAMLFMSLMVLFID*