ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_543_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 12220..13278

Top 3 Functional Annotations

Value Algorithm Source
ATPase AAA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRT2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 331.0
  • Bit_score: 576
  • Evalue 2.00e-161
  • rbh
ATPase AAA {ECO:0000313|EMBL:EIM02174.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 331.0
  • Bit_score: 576
  • Evalue 2.80e-161
putative secretion ATPase, PEP-CTERM locus subfamily similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 352.0
  • Bit_score: 564
  • Evalue 2.40e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGTATCAGGCGTTTTACAAACTGCGCGGCAAGCCTTTCCAGTTGACGCCAGATCCGGGAATGCTGTTCCCCAGCAAGGGCCACCGGCGCGCCATGGCGTATCTGCTCTACGGCTTCGAGCAGGGCGAAGGCTTCGTGGTGATCACCGGCGCCGTCGGCACCGGCAAGACGCTGCTGATCCAGAAGCTGTTCGAGGAACTCGCGCACCGCAACCTTGCCGTGGCCAGCATCGCCTCGGCCAACCTCGATGGCGAGGACATGCTGCCGGCCGTGGCGTCGGCGCTTGCGCTGCCTTTCGAGGGGCGCAGCAAGGAAGCGCTGCTGCAGGATGTGAAGCGGCACCTGATATCGCTGCACGCCCGCCAGACGCACGCCCTGCTGGTGGTGGACGAAGCGCAGACGCTTACCCCGGCAGCGCTCGAGATGCTGCGCATCCTGTCCAATCTCGAGTTCAGGGGCCGGGCGCTGCTGCAGGTGTTTCTGGTCGGCCAGACCGAACTGCGGCGCATCATCGTCAGCAACCACATGAAGCAGTTGCGCCAGCGCATCATCGCCTCCCACCGGCTCGACCCGATGAGCGAGGAGGAAAGTCGCGCGTACATCCTGCACCGCCTGCATGCCGTCGGCTGGAACAACGACCCGGAACTGGCGCCCGAAGTCTTCAGCGGGGTTTACCTGGTCAGCCGCGGGATCCCGCGCAAGATCAACCTCATCATGGACCGGCTGCTGCTGCACGGTTACCTGGAGGAACTGCACAGCCTGGACCAGGCGGAACTCGCCATCGTGCTCGACGAGATCCACGAGGAGATGGCCGGCGCATCGCCGACGCTGGAAGCGCCCGTTGCGCCCCAGGAGCTGGACCTGACGCGTGCCGTCGTGCCATCGAACGCGGAAAGCGCACTTGCCGCGCTGGACCTGGAACGCAACAGAATCATGTTGCAGTTGCTGCGCGAAGAGGTCCGGCGGCGGGAGGTGCTGCTGGCCGCGTCGCCACAGCCGCCGGTCATGCGCGAAGCGGCGGTCGCCGACGCGCTGCGTTCGGGCCAGGACGACACATGA
PROTEIN sequence
Length: 353
MYQAFYKLRGKPFQLTPDPGMLFPSKGHRRAMAYLLYGFEQGEGFVVITGAVGTGKTLLIQKLFEELAHRNLAVASIASANLDGEDMLPAVASALALPFEGRSKEALLQDVKRHLISLHARQTHALLVVDEAQTLTPAALEMLRILSNLEFRGRALLQVFLVGQTELRRIIVSNHMKQLRQRIIASHRLDPMSEEESRAYILHRLHAVGWNNDPELAPEVFSGVYLVSRGIPRKINLIMDRLLLHGYLEELHSLDQAELAIVLDEIHEEMAGASPTLEAPVAPQELDLTRAVVPSNAESALAALDLERNRIMLQLLREEVRRREVLLAASPQPPVMREAAVADALRSGQDDT*