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scnpilot_solids2_trim150_scaffold_817_9

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5411..5716)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y414_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 94.0
  • Bit_score: 102
  • Evalue 1.90e-19
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 94.0
  • Bit_score: 102
  • Evalue 5.80e-20
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACB34536.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 94.0
  • Bit_score: 102
  • Evalue 2.60e-19

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAGTGCACCCAACTACATCAACGCCGCACAGCAGCGCGTGTTGAAAATCCTGATGCTGCTCGCCGGCCACGAAGTGATGGGCCTGGCGCCCGGCGAGGTGGCCAAGGCCGTGCACACCAGCGCCAGCAATGTCACCCGCGACCTGGCCAACCTGCGCGAGGCCGGCATGGCCGAGACGCTCGACACCGGTGCCTGGCGCATCACCCCGCGCGTGGGCCAGATCGCGCTGCGCGTTCTCAACTCACTCGGTGAAGCCCGCAAGCGTGTCGACGAGACCGCACAACGCTTCAGCGTCGATCGTTAA
PROTEIN sequence
Length: 102
MSAPNYINAAQQRVLKILMLLAGHEVMGLAPGEVAKAVHTSASNVTRDLANLREAGMAETLDTGAWRITPRVGQIALRVLNSLGEARKRVDETAQRFSVDR*