ggKbase home page

scnpilot_solids2_trim150_scaffold_2196_13

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(9575..10762)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3720E similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 348.0
  • Bit_score: 334
  • Evalue 1.90e-88
  • rbh
Putative integrase {ECO:0000313|EMBL:CAB65361.1}; TaxID=47881 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae.;" source="Pseudomonas pavonaceae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 379.0
  • Bit_score: 323
  • Evalue 3.60e-85
Integrase similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 369.0
  • Bit_score: 300
  • Evalue 7.40e-79
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas pavonaceae → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCTGTGCCCGGTGGTCGCGCACCCGGGCACAGCATTCATGCATTACCGCACGTCTGTACCAGACCCGAGCTACCATGCGCCTGTGAAACCAACGGCGATCGTGACTCGGCAAGAGACATCTGCCCCCATCTCAAGCCAAGTTTCTGACCTACAGGCGTCCGCCATTTCAGCGAACACCAAGAGGGCCTACCGGTCCGACTGGCGATCGTTCGAGATGTGGTGCCGGATGCATGGCGACACGTCGCTGCCCGCTTCCCCTGAAGTTGTTTCGGAGTACCTCGCTTCCGCTGCATCCCGTGTTGACCGTTCTGGCCGGTGGCTGTTCTCGCCGGCAACGTTGGAGAGGCGGCTCGCCGCGATCGGCAAGATCCACCAGATCTCCGGTCTGATGTCCCCGTCCAGACATCCTTCGGTTGCAACCACGATGGCCGGGATCAGGCGAACGAGGCGACGACCGCCGCGGAGAGTCGCGCCTGTGCTGCTCGATGACCTCAAGTCGATGATCTCCCGAATCGACGAGAAGCACTACCCGTCGGCGGTGATCGGGATCCGGGACCACGCGATCCTGCTCACCGGGTTCGCCGGCGCATTCCGTCGATCCGAACTCGCCGAAATGGATTTCGGCGACATCAGCCTGCAGGCATCGGACGGCGTTCATGTTCGGCTGCGCCACTCGAAGACAGATCAAGAGGGCCGCGGCTCCGTACGTGCGTTGCCCTACGGGTCCAACCCGATCACCTGTCCGCCGTGCGCATTGGCAAAGTGGGTGCGGATCATGTCGGCCGACCAGGATGGCGGGCGCCCAGCGGTGATGGCAGAGGTGTCTCGGATCGCCACCGCCCCCGACGGGCACGTGTGTCGTTCGTGGCCAGAGGTCTCATCACTGGACGGCGACTCACCGCTGTTCACCCCAGTGCACAAGACCGGAAGGATCGGGCAGTCGCGGCTTTCCGGTGAGGCGATCAGCTTCAGGGTAAAAGCAAGGGTGAAGGCAGCCGGAATGGACCCGTCCAGATTCGCCGGCCACAGCTTGCGGTCCGGGTTCGTCACGCAGGCGGTGCGCGCCGGCGCCGACACTGGGGCGATCATGCGGCAGACCGGGCATCATTCGCCTGCGATGGTCGAGGTCTACCGTAGGGAGAACGCTCCGCTGATCGGAAACGCCGTCGTCAGTCTGGGCCTGTGA
PROTEIN sequence
Length: 396
MLCPVVAHPGTAFMHYRTSVPDPSYHAPVKPTAIVTRQETSAPISSQVSDLQASAISANTKRAYRSDWRSFEMWCRMHGDTSLPASPEVVSEYLASAASRVDRSGRWLFSPATLERRLAAIGKIHQISGLMSPSRHPSVATTMAGIRRTRRRPPRRVAPVLLDDLKSMISRIDEKHYPSAVIGIRDHAILLTGFAGAFRRSELAEMDFGDISLQASDGVHVRLRHSKTDQEGRGSVRALPYGSNPITCPPCALAKWVRIMSADQDGGRPAVMAEVSRIATAPDGHVCRSWPEVSSLDGDSPLFTPVHKTGRIGQSRLSGEAISFRVKARVKAAGMDPSRFAGHSLRSGFVTQAVRAGADTGAIMRQTGHHSPAMVEVYRRENAPLIGNAVVSLGL*