ggKbase home page

scnpilot_solids2_trim150_scaffold_1073_8

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(9630..10859)

Top 3 Functional Annotations

Value Algorithm Source
Parallel beta-helix repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECW5_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 397.0
  • Bit_score: 368
  • Evalue 9.50e-99
  • rbh
parallel beta-helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 397.0
  • Bit_score: 368
  • Evalue 3.00e-99
  • rbh
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AEI48437.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 397.0
  • Bit_score: 368
  • Evalue 1.30e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1230
ATGAAAATTAGAATATTCCTTTTTGCAGTAGCAATAGCTTTTGCAACGCTTTCGTGCAATTCCGGCAATAAAACCGCAACCTTAAACGAAAGCTTTGAAACTGAACTGCTGCAAATGTTTGCCGATGCAAAAGATGGCGATATTATAGAATTACCCGAAGGAAATTTTTCATTGCAGAGACCATTGATTTTAGATGGTGTAAACAATATTACCATTCGCGGTAAAGGAAAAGATAAAACCATTTTAAATTTTGCTAAGCAAAAAGATGGTGCAGAAGGAATTAGAGTTACGGCAAACAATATTGTGATGGAAGAATTTACTGCTTTAAATGCAAAAGGCGATTGCATAAAAGTGTTAGATGCCACAGGGGTTACCCTGCGCAATTTAAAAGTGGGCTGGACAAAAATGCACTCTCCCGAAAATGGCTCTTATGCACTTTATCCGGTGGGCTGCACCAATGTGATAATTGATAATTGTGAAGTTTTTGGCAGCAGCGATGCAGGCGCGTATGTTGGGCAATCGAAAAATATTATTGTGAAGAATTGCCATGTGCACGATAATGTTGCCGGCATTGAAATTGAGAACAGTACCGATGCAGATGTGTTTAATAATTTATGCGAAAACAATACCGGAGGAATTTTAATTTTCGATTTGCCGGAACTGCCTGTAAAAGAAGGTAAACGCTGCCGTGTTTTTAATAATAAAGTGATAAACAATAATGTGAAAAATTTTGGCGTAAAAGGAACGGTAGTAGCTGAAATTCCTGCCGGCACAGGCATTATTGTGATGGCAACCAACGATTGCAGAATCTACAATAACGAGATAAAAGGAAACAACACCATGAGTGCTGCAATCTTTTCTTACGATGCACTCCAAAAACCATTTAAAGATTCACTTTACGACCCATTCCCGGGCGGTATAAGTTTATACGATAATAATATTGAACGCGGAAGTGGAAAGCCTGATGGCAGCGTTGTTTTTGGTCAAATGTTTACTGCAATGTTTGGCGATAAAGTGCCCGAAATTATTTACGATGGCTCTGTAAATCCTAAGTATTTTGATAATTATGGAAACATAAAACCTGAAAGCAGAATTTGTATTAGAAACAACGGTAATGTTGAATTTGTGAACTTGGATATTGCCAATAAAGGAAAAAATATGAGCAAAGATATTTCTAAAATGGATTGCGAACTTGCTCCACTGAACGAAATAAAAATTGCTTCGAATTAA
PROTEIN sequence
Length: 410
MKIRIFLFAVAIAFATLSCNSGNKTATLNESFETELLQMFADAKDGDIIELPEGNFSLQRPLILDGVNNITIRGKGKDKTILNFAKQKDGAEGIRVTANNIVMEEFTALNAKGDCIKVLDATGVTLRNLKVGWTKMHSPENGSYALYPVGCTNVIIDNCEVFGSSDAGAYVGQSKNIIVKNCHVHDNVAGIEIENSTDADVFNNLCENNTGGILIFDLPELPVKEGKRCRVFNNKVINNNVKNFGVKGTVVAEIPAGTGIIVMATNDCRIYNNEIKGNNTMSAAIFSYDALQKPFKDSLYDPFPGGISLYDNNIERGSGKPDGSVVFGQMFTAMFGDKVPEIIYDGSVNPKYFDNYGNIKPESRICIRNNGNVEFVNLDIANKGKNMSKDISKMDCELAPLNEIKIASN*