ggKbase home page

scnpilot_solids2_trim150_scaffold_1563_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 12777..13211

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 142.0
  • Bit_score: 182
  • Evalue 4.80e-43
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GN77_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 142.0
  • Bit_score: 182
  • Evalue 3.40e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 139.0
  • Bit_score: 170
  • Evalue 4.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gordonia amarae → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGATCCTGCTCGATACCGGGCCGATCGTTGCTGCGGCCTTCACGACCGAGCGCTTCCACCGCGAATGCGCGGAGCTCTTTACGGGCCTCCGATTGGCCAACCGCGAGATGCTCATCCCAGCCACAGTGACGGCCGAAGCGGGCTACCTCATCAATCGGCTGGGAGGTCCGCGCGACGAGGCCAACTTTCTGCGGGGCGTGGGCGAGGGCGACCTGGTGCCCGTCAATCTGACCGACGTCGATTACCTGCGGATGGCCGAACTCGTCGAGCAGTATGCGGATCTTCCCCTGGGTGCCACCGATGCATCGGTGATTGCGCTTGCCGAACGGCTCGGTGTCACGGAGGTCGCAACGATTGATCGCAGGCACTTCACGGTAGTCCGGCCCCGACACGTCGTTGCTCTGACGTTGCTCCCTGAGCGGCTGGCCGATTGA
PROTEIN sequence
Length: 145
MILLDTGPIVAAAFTTERFHRECAELFTGLRLANREMLIPATVTAEAGYLINRLGGPRDEANFLRGVGEGDLVPVNLTDVDYLRMAELVEQYADLPLGATDASVIALAERLGVTEVATIDRRHFTVVRPRHVVALTLLPERLAD*