ggKbase home page

scnpilot_solids2_trim150_scaffold_1842_15

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(10487..11722)

Top 3 Functional Annotations

Value Algorithm Source
Phage-related integrase n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTG5_XANC5 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 409.0
  • Bit_score: 572
  • Evalue 3.30e-160
phage-related integrase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 409.0
  • Bit_score: 572
  • Evalue 1.00e-160
Integrase {ECO:0000313|EMBL:AJC44806.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 409.0
  • Bit_score: 572
  • Evalue 4.70e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAAACTGACCGATGTCGCCGTGCGCAAGGCCGCCCCACGCGCCAAGCGGTACAAGCTGGCGGATGGCGGAGGCATGTATCTCGAGGTGACGCCGGGTGGAGCGAAGTACTGGCGGCTCAAGTACCGGGTCGCAGGCCGGGAGAAACGGTTGGCACTGGGGGTGTATCCGACGGTTTCCCTGTCCACTGCCAGGCAAGGGTGCCAGGAGGCTCATCGGTTATTGGTCCAGGGCATTGATCCTGGTGCAGCCCGCAAGGCGGCAAAACAGCAGAAGGTCGAAGTAGCCACGGCGGCTAGGGACACCTTTGAGGCGGTCGCTCGAGAATGGATGGCCCGGCAGCAGGTGGCCGAGGTGACGGCCAACAAGACCCGGTGGATCCTTGAGACCTTTCTGTTTCCAGAAATCGGCAGCCGGCCAATTGCTGAGGTTACGCCGCGCGAGCTGCTGGCGGCCCTGCGCAAGGTCGAGGAAAGCGGCAAGCTGGAGACCGCCAAGCGGGCCAAGATCAAGGCCGGGCAGGTGTTTCGTCATGCCGTACTCGAAGGCAAAGTCGAGAGCGATCCCACTGCCAGTCTGCGCGGTGCGCTGAAGCCCCCGAGGAATCGTCACCATGCCGCTATTACGGACCCGGTTCAGATAGGGGAGCTGCTGCGTGCCATCGACGGCTTCACCGGGCAACCTGTCACGTTGGCTGCACTGAAACTGGCGCCGCTGGTGTTCGTGCGCCCGGGAGAACTGAGGCAGGCGGAATGGGCCGAAATCGATCTGGAGGGAGCCATGTGGCGGATTCCACCTGAGCGTATGAAGATGAAGGCAACCCACCTGGTACCGCTTTCCAGTCAGGCACTGGCTGTCCTGCGCGAACTGCAGCCCTTGACTGGCCAAGGCCGTTACATGTTTCCAGGGCTGCGTTCCACCAGTCGGCCAATGAGCGAGAACACAGTGAATGCCGCACTGCGGCGACTTGGCTACTCCGGCAACGAGATGACCGGTCATGGCTTTCGTAGCGTAGCCGCGACACGACTCAACGAGATGGGTTGGAACCCGGATGCGATCGAGCGCCAACTGGCACATGCCGAATCGAACAAGGTGCGAGATGCCTACACGCACGCTGCGCAGTATCTGGATCAGCGTAAGCAGATGATGCAGGTATGGGCGGATTATCTCGACACGCTGCGCAAAAGTGGTAGGGTCATCCCTATCAGACAGGCGGGTATTAAGTCTCACGAATAG
PROTEIN sequence
Length: 412
MKLTDVAVRKAAPRAKRYKLADGGGMYLEVTPGGAKYWRLKYRVAGREKRLALGVYPTVSLSTARQGCQEAHRLLVQGIDPGAARKAAKQQKVEVATAARDTFEAVAREWMARQQVAEVTANKTRWILETFLFPEIGSRPIAEVTPRELLAALRKVEESGKLETAKRAKIKAGQVFRHAVLEGKVESDPTASLRGALKPPRNRHHAAITDPVQIGELLRAIDGFTGQPVTLAALKLAPLVFVRPGELRQAEWAEIDLEGAMWRIPPERMKMKATHLVPLSSQALAVLRELQPLTGQGRYMFPGLRSTSRPMSENTVNAALRRLGYSGNEMTGHGFRSVAATRLNEMGWNPDAIERQLAHAESNKVRDAYTHAAQYLDQRKQMMQVWADYLDTLRKSGRVIPIRQAGIKSHE*