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scnpilot_solids2_trim150_scaffold_1005_4

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5111..5641)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 176.0
  • Bit_score: 341
  • Evalue 5.40e-91
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL95230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 176.0
  • Bit_score: 341
  • Evalue 7.50e-91
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 159.0
  • Bit_score: 127
  • Evalue 5.00e-27

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCCGATTCCCGACCCCTGGCCAGCGACGGTTCCACCGACGCGCTGTTCGTCGTGGTGTACGCGCGGCTCAAGGCGATGGCCGCCCGACAGTTGTCGAATCGTCGCCAGGCCACCCTGGACACCACCGAACTGGTGCACGAGCTGTACCTGCGCATGGGCCAGCGCGAGGCGTTGCATTTCGACCATCCCGCCCAGTTCTTTGCCTACGCCGCGCGCGCCATGCGCCACCTGCTGATCAACCGCGCCCGTGATCGCCTGCGCCTGTGCGCGGGCGGGCAGTGGCTGCGGGTCACCCTTGATGACCAGGATCTGAAACTGGCGCTCGACACCGCCGAGCAGACGCTGGCGCTGGACGCCGCGCTGGACGCGCTGGAACAGTCCGACGCCCGTGCCGCCCAGGTGGTGGAACTGCGTTACTTCGCCGGGCTCAGCCTGGAACAGGTCGCCGACACGCTCGGCGTGGCCCGGCGCACCATCGACCGCGACTGGCGCTTTGCCCGCGCATTCATCAAGGCCCGCATGGGTTGA
PROTEIN sequence
Length: 177
MSDSRPLASDGSTDALFVVVYARLKAMAARQLSNRRQATLDTTELVHELYLRMGQREALHFDHPAQFFAYAARAMRHLLINRARDRLRLCAGGQWLRVTLDDQDLKLALDTAEQTLALDAALDALEQSDARAAQVVELRYFAGLSLEQVADTLGVARRTIDRDWRFARAFIKARMG*