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scnpilot_solids2_trim150_scaffold_1008_5

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 3897..4484

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK1_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 190.0
  • Bit_score: 166
  • Evalue 3.40e-38
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:AHM63012.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 177.0
  • Bit_score: 190
  • Evalue 1.80e-45
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 190.0
  • Bit_score: 166
  • Evalue 1.10e-38

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Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGAACCAGGATGAACCCAATAAAAATGAGGATAAAATATTACTTCAACAGGTAGCGGAGGGGAGTACCCGTGCATTTGATCAGTTATTTGAAAAATATTGGCAGCAGGCGTATTCAAGCGCTTATAAAAGATTGAAGAACCACGATGATGCAAAAGATATTGTACAGGAAGTGTTTACTAATATATGGATTAAAAGACAAACCACACAAATAGAAAATTTGCCGGCTTACCTGCATGTAGCTATCCGTAATAAAGTAATAAAGTTTATTCTTAAGCAAAAGCCTGTTCATTCTTTTTTTGATTTTCTGGATCAGGCTTCCGAAAAAAATTTGAACGCAGATTCTCCACTTCTTTGGAAAGATTTTATGAAAGCCTATGAGGCGCTCCTGAAAACATTACCTCCAAAAAGGCAAGCGATCTTCCGGCTTCGGTATGAAGAAAATTTATCAACAAAAGCTATTTCTACGCAAATGGGTATTAACAGGAAAACCGTTCAGAACCAACTTGGCAAGGCGGTTGAGACCTTAAAGGTTTCTTTGCTGCGTATGCTTACTTTAATCATATTATTCTTTGCTAACTTATTTTAA
PROTEIN sequence
Length: 196
MNQDEPNKNEDKILLQQVAEGSTRAFDQLFEKYWQQAYSSAYKRLKNHDDAKDIVQEVFTNIWIKRQTTQIENLPAYLHVAIRNKVIKFILKQKPVHSFFDFLDQASEKNLNADSPLLWKDFMKAYEALLKTLPPKRQAIFRLRYEENLSTKAISTQMGINRKTVQNQLGKAVETLKVSLLRMLTLIILFFANLF*