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scnpilot_solids2_trim150_scaffold_5560_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(273..1535)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QX21_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 420.0
  • Bit_score: 809
  • Evalue 1.70e-231
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 420.0
  • Bit_score: 809
  • Evalue 2.30e-231
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 420.0
  • Bit_score: 741
  • Evalue 1.30e-211

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGTCGATCTCGGCCCTGGAGGCCGAACTGCGCGACGGCGTCATGGAGGTGCTGGACGCCATCGCCGTCGACTTCGGCGAGTTCCGCAAGCTGCAGGACAAGCTGGTCGAGGCGCGCCTGAAGGGCGAAGTCCTGACCGCCAAGGACCAGAAGACCTATGAGGCTCTGACGGCGTCCATCTCGGACCGCCTGAAGACGATGAAGCTGAACAACGCCCGCATCGAGGCGCTGGTCGAACAGCTGTACGCCATCAACAAGCGCCTGATCGGCCAGGAAGGCCGCCTGCTGCGTCTGGCCGACGGCTACGGCATTTCGCGGCCTGAGTTCCTCAAGGCCTATTTCGGCTCGGAGATGGACCCGACCTGGGCCGAGCGCATCAAGGAGATGGGCGTCCGCTGGACCAAGTTCAGCGAGAATGAAGCCGCCCAGATCGACACGATCCGCACCCAGATCGCCGCTGTCGCCACCGAGGCGGGCGTGCCGATCGACGACTATCGCCGCATCGTCCAGATGGTGCAGAAGGGCGAGCGCGAGGCCCGTCAGGCCAAGAAGGAGATGGTCGAGGCCAACCTGCGCCTCGTGATCTCCATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTGGACCTGATCCAGGAGGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGTCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGTCAGGCGATCACCCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGATCGTCCGCACCCAGCGCCAGATGCTGCACGAGATCGGCCGCGAGGCGACCCCGGAAGAGCTGGCCGAACGCCTGGCCATGCCGCTGGAGAAGGTCCGCAAGGTGCTGAAGATCGCCAAGGAGCCGATCTCGCTGGAAACCCCGATCGGCGACGAGGAAGACAGCCACCTGGGCGACTTCATCGAGGACAAGAACGCCGTCCTGCCGATCGACGCCGCCATCCAGTCGAACCTGCGCGAGACGACGACCCGCGTGCTGGCTTCGCTGACCCCGCGCGAAGAGCGCGTCCTGCGGATGCGCTTCGGCATCGGTATGAACACCGACCACACCCTGGAAGAGGTCGGCCAGCAGTTCTCGGTCACGCGCGAACGCATCCGTCAGATCGAGGCCAAGGCCCTGCGCAAGCTGAAGCACCCCTCGCGGTCGCGGAAGCTGCGGAGCTTCCTGGACAGCTGA
PROTEIN sequence
Length: 421
MSISALEAELRDGVMEVLDAIAVDFGEFRKLQDKLVEARLKGEVLTAKDQKTYEALTASISDRLKTMKLNNARIEALVEQLYAINKRLIGQEGRLLRLADGYGISRPEFLKAYFGSEMDPTWAERIKEMGVRWTKFSENEAAQIDTIRTQIAAVATEAGVPIDDYRRIVQMVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTQRQMLHEIGREATPEELAERLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS*