ggKbase home page

scnpilot_solids2_trim150_scaffold_10674_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 505..1596

Top 3 Functional Annotations

Value Algorithm Source
Putative diguanylate cyclase (GGDEF) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ER03_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 361.0
  • Bit_score: 157
  • Evalue 2.30e-35
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32543.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 354.0
  • Bit_score: 163
  • Evalue 7.50e-37
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 361.0
  • Bit_score: 157
  • Evalue 7.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
GTGCCGAAAATCGATTTCATTGATCCGCGTTTACCGGATGATGTCGGCAGGCGACTGCTCGACATGCTGTATTCTTCGCCGCGTTCGACAGTGGCATATGTATGCGGTCTCGGGATCATGGTCATAGCGCTGTGGCGCCACACCGGCGATCACCTGCTAATCGCCGGATCGATTGCCACGATCGTATTGATCGCATTCAGAATTGCGTTCGTCGCGCGCGCCAAATCGTCGTCGCTGTATCTGCCGACGCTGCTGGCGTTCGGATGCATCTATTCTGTTCTGTTGGCGGCGTTGGTCGTAAGATCGTTCGCTATCGATGATCGCCTCGCCATTGCCCTTATCACCGTGGCAGCAGCAGGCTATCTCTCGGGAGTCACGAACAGAGCGGCGGCCGTGCCAACCCTCGCGATCCCGCATGTATCGACGCTGTTTGCTCCGTTAGTAGTGACAGCCGGTATAGCGAGCGGCGGCGAATATTGGGCGGCGTCGGTTCTTCTGTTGCTCTACTGGATCGGTTGCATACAACTGATCATGACGATGCATCGTCGCATCAGGGCGCAATTAATAGCCGAGCACGACCTGGCAAATGCCGCCTCGACGGATGCCTTGACGGGCCTCCGAAATCGGAGAGCTTTCGATACAGCCCTCGTGCATCGGCTTGGATCGGGCTCAGCCGCCATCGTTGCCATGATCGATCTCGATCGGTTCAAGCAGGTCAACGATGCGCACGGACATGATGTCGGTGACGAATTGTTGAAGGCCGTGGCAAAGCGCCTTACGGCCGACGTGACCGGAGGTGACCTGGTCGCCCGTCTGGGAGGTGACGAATTTGCGGTGCTATTCGACCTTGCCACGAACATCACCGACGCAACACGCGCCGCGGAAGCGATCGCGAGCCGGATTGAACAGGCGGTAAAGGTCGGCACCATCGATCTACAGGTGGGCGCGAGCGTTGGTCTGGCGGTTGCTATGTCGGGCGATACCGCGCGCTCGCTCAAGCAGCGCGCAGATGAGCGTCTCTACGACGCCAAGCGCGCCGGGCGCATGTCCCTTGACATGGGTGTAAGATCGCCGCGAATGGCAGCGGGATAA
PROTEIN sequence
Length: 364
VPKIDFIDPRLPDDVGRRLLDMLYSSPRSTVAYVCGLGIMVIALWRHTGDHLLIAGSIATIVLIAFRIAFVARAKSSSLYLPTLLAFGCIYSVLLAALVVRSFAIDDRLAIALITVAAAGYLSGVTNRAAAVPTLAIPHVSTLFAPLVVTAGIASGGEYWAASVLLLLYWIGCIQLIMTMHRRIRAQLIAEHDLANAASTDALTGLRNRRAFDTALVHRLGSGSAAIVAMIDLDRFKQVNDAHGHDVGDELLKAVAKRLTADVTGGDLVARLGGDEFAVLFDLATNITDATRAAEAIASRIEQAVKVGTIDLQVGASVGLAVAMSGDTARSLKQRADERLYDAKRAGRMSLDMGVRSPRMAAG*