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scnpilot_solids2_trim150_scaffold_4432_6

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5139..6629)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C3K7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 492.0
  • Bit_score: 530
  • Evalue 2.30e-147
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EGD19881.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 492.0
  • Bit_score: 530
  • Evalue 3.20e-147
putative NTPase VagA; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 496.0
  • Bit_score: 464
  • Evalue 4.80e-128

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Taxonomy

Xanthomonas gardneri → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGAATGGCAAGACCCGGGCCATCGTGGTCGTCGTTCTGGGGATGTTGGCCGTGGGGGCGGGCGCCATGCTCGCCGGCGCGCTGACGCTGTGGCGGTTGAAGCTGTCGATCCCGCTGGAGTTCACCACGTGGTGGCAGTACGCGCGGGCGCTGGATCTGCCGCAGCTCGCGCCGTATGCGGGCACGATCAAATTCGCCGGTTACGCCGGTTTCGGACTGCCGTTGCTGCTCTGGGTGATCGTGGCGGTGTTCGTGCTCAAGCCGCGCGCGAAGGCGTTCCACGGCGATGCGCGCTTCGCCAGCCGGGCGGATCTGGCCCGGGCAGGGCTGCTGAAGCCGGGCACCGATGGCGTGGTCATCGGACGTTCCGGTGGCCGTTTCCTGTACCTGCGCGGCCTGCAGCACATCATCATGACCGCGCCCACGCGCACCGGCAAAACCAGCAGCATCGCGATCCCGGTGTTGCTCAGCTACGGCCATTCGGCGGTGGTGATGGATCTGAAGGGCGAGCTGTTCCAGGCCACCAGCGGTTACCGGCGTACGCTGGGCCAGACGATCTGCAAGTTCGCACCGTACGCGGAAGATGGTCGCACGCACCGCTTCAACCCGTTCCTGTGCCTGTCGTCCGACCCGCGTGTGCGGGTCAGCGAGATCCAGACCATCGGCGCGATCCTCTATCCCGACGAGCCACAGAAAGATCCGTTCTGGACGGCGCAGGCGCGCAGTGCATTCCTGGGCTTCGCTTCGTACATGTACGAGCTGTGGGACGAGCGCGTGGCCGGCGGCATGCGGCTGGATCCCAATGTCGACGCGTCGTTTCCCAGCCTCGAACGCATCTACCGGCTCACCAGCGGCGACGGCCGCGGCGGCGACTTCAAGCAGACGATCAGGCAGTGGCTGGATGATCGGTCCGTTCTCAGTGAGCAGACACGCACCACGCTGTCCGGCCTCGTCGGCCTGGCCACCGAGACGTTCTCCTCGGTGATCGCCACCGTGCAGGAGCCGCTGCAGCAGTTCATCAGCCCGATCCTGGCCGCCGCCACCAACGCCAGTGATTTCGATGTGGCCAGCTTGCGCCGGCAGCCGATGACGATCTACGTGGTGATCCCGCCGGCGAAGCTGGGCGAATCGGGCAAGCTTCTCAACATCTTCTTCTCCACCGTGGTCGGCCAGAACCTGAAGACGACGCCGCAGGAAGACCCCTCCATCACGCACCAGGTGTTGCTGCTGATGGACGAGTTCACCGCGATGGGGCGGGTGAACGCGTTGTCCGAGCGCATCTCGATCACCGCCGGCTACTGGGTGCGCGACCTGACCATCATCCAGAGCAACTCGCAGCTGCGCGCTACCTACGGCGCGGATGCCGCGCAGACCTACGTGACCAACCATGCGGCGAGCATCGTGTTCACCCCGCGTGAGCAGCAGGATGCGGAGGATTATTCGAAGATGCTCGGCGACACCACCGCCACAGCGAGGACCGCCGCCCGCTGA
PROTEIN sequence
Length: 497
MNGKTRAIVVVVLGMLAVGAGAMLAGALTLWRLKLSIPLEFTTWWQYARALDLPQLAPYAGTIKFAGYAGFGLPLLLWVIVAVFVLKPRAKAFHGDARFASRADLARAGLLKPGTDGVVIGRSGGRFLYLRGLQHIIMTAPTRTGKTSSIAIPVLLSYGHSAVVMDLKGELFQATSGYRRTLGQTICKFAPYAEDGRTHRFNPFLCLSSDPRVRVSEIQTIGAILYPDEPQKDPFWTAQARSAFLGFASYMYELWDERVAGGMRLDPNVDASFPSLERIYRLTSGDGRGGDFKQTIRQWLDDRSVLSEQTRTTLSGLVGLATETFSSVIATVQEPLQQFISPILAAATNASDFDVASLRRQPMTIYVVIPPAKLGESGKLLNIFFSTVVGQNLKTTPQEDPSITHQVLLLMDEFTAMGRVNALSERISITAGYWVRDLTIIQSNSQLRATYGADAAQTYVTNHAASIVFTPREQQDAEDYSKMLGDTTATARTAAR*