ggKbase home page

scnpilot_solids2_trim150_scaffold_11125_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 175..705

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial biogenesis protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UW80_XANC8 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 175.0
  • Bit_score: 146
  • Evalue 1.90e-32
Strain LMCP11 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24653.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 175.0
  • Bit_score: 148
  • Evalue 1.20e-32
fimbrial biogenesis protein; K08084 type IV fimbrial biogenesis protein FimT similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 175.0
  • Bit_score: 146
  • Evalue 6.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGCCCAAACGCCCTGCCGGATTCACCCTGATCGAGCTGCTGGCCACCACCTCCATCCTGGCCATCGTCGCCGGCATCGCGCTGTCACCGATGAGCGCGCTGCTCGAGCGCCACCGCGCTTCCGCCGCCGCATCCGCCTTGGTCGCCCACATGCAGCTCGCCCGCATGGCGGCCGTCAACCGAGGCCGCCGCGTGGTGCTCTGCCCGAGCAGCGACGGCGCCGGCTGCGACGCCGGCACCGACTGGAGTCCCGGCTGGCTGCTGTTCGTAGATCAGGACGGCAACCGGCAAGCCGACGCCACCGACGACATTCTCCGCGCCGACCAGCAGCCCACCAGCCGCCACCTCCGCATCGTCGGCAGCGCCGGGCGCCAGCAGCTGCGCTACCTGCCCGACGGCACCAGCGGCGGCAGCAACCTGACGCTCTCCATCTGCAGCCAGCGCGGCGAACTGCTGGCCCGGGTCATCGTCAACAACGTGGGCCGTCCGCGCAGCGAGCGGCCGTCGACGACACTCACCTGCCCCCGCTGA
PROTEIN sequence
Length: 177
MPKRPAGFTLIELLATTSILAIVAGIALSPMSALLERHRASAAASALVAHMQLARMAAVNRGRRVVLCPSSDGAGCDAGTDWSPGWLLFVDQDGNRQADATDDILRADQQPTSRHLRIVGSAGRQQLRYLPDGTSGGSNLTLSICSQRGELLARVIVNNVGRPRSERPSTTLTCPR*