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scnpilot_solids2_trim150_scaffold_20735_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(23..1312)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UMX6_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 434.0
  • Bit_score: 478
  • Evalue 5.20e-132
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 435.0
  • Bit_score: 497
  • Evalue 2.00e-137
RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 434.0
  • Bit_score: 478
  • Evalue 1.60e-132
  • rbh

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
CTGGTCCTCGAACGAAACCCGCTGCTGGAACAGGAATCCGACGAGGAAGAAGCCGCGCTGGCCGGCGAAGGGGATTCCGCCGCGCTGGAAGCCGCCGCCTGGGACGAACTGCCCGAACCGATGTTCCTGTCCGGCGGCAGTTACACCGGCGATATGGATGAGGACGCCACCACGCGCATCGCCGCCGGCGAATCCAGCGACCCGCGCCAGCGCCTGCTGCAACAGCTGCAGTTGCGGTGCAATGCCCATGACATGGCCATGGCCGCTTGGTGGCTGGACTGTTGCGATGACCGTGGCTATCTGGAAGGTGAGCCGACGGAACTGGCACGTCAGGGTGCAGCGCAGCTGCGCGACGCCCTGCCAGAGGTCGATGCCGAAAGCCTGATGGCTGTCCGCCAGCGCCTGCTGCTGGACGGCGACTGGCCCGGCATGGCCGCTGCCGATCCGCGTGAGTGCCTGATGGCCCAGCTGCGCGCCCTGCCCGCCAGCGACACCCGCACCCTGGCGCTGCGCATGGTCGGCGAGCAGCTGGACGCATTGGCCCGGCATGACCTTGCCGCCATCGCCGAACGGCTGGGGGCATCCGCCGCCGACCTGTCAGCGGCCGTGTCACTGGTGCTGTCGCTGCAACCGCACCCGGTGGAACAGCCACCGGAGCCGGAGCCCGCCTTCATCGTGCCGGACGTGATCGCCTGGCGCGCCGGCGGGGGCTGGCAGGTACGCCTGAACACCCGCAGCGCCCCGCGCCTGCGCCTCTGTGCGCATGCGGAGCAGGCCTCCGGTCATGCCGGCATGCGCGGGCTGCTGGACGAGGCGCGCTGGCTGCTGCGCAGCCTGGGCATCCGCAACGAAACCCTGCTCAAGACCGCGCGCGCGCTGGTCACGCGCCAGCAGGCCTTCCTCGAGCAGGGCGAGGAGGCCATCGCGCCGCTCACGCTGAAGGAGGTGGCCGAGGAAATCGGGGTGCACGAATCCACCGTGTCGCGCATCACCACCGGCAAATACATCCAGACGCCCCGCGGCACCCTTGAACTCAAGCGCCTGTTCGCGGTGCGGCTGGAGGGTGCGGAGGTGTCCGGTGCGGCGATCAAGGCGATGGTCCGGCGCCTGATCGAGGATGAACCGGCGCACGCGCCGCTGGCCGACGAAGTGATCGCCGCCATGCTGGCCCGGCAGGGCATCCGCGTGGCGCGGCGCACCGTGGCCAAGTATCGTGAACAGCTGTCGATCGCGCCGGCGCGGATGCGCCGCCGGGAGCAGGCACCAGCCCCGATGGCGCGGCTGGGGTGA
PROTEIN sequence
Length: 430
LVLERNPLLEQESDEEEAALAGEGDSAALEAAAWDELPEPMFLSGGSYTGDMDEDATTRIAAGESSDPRQRLLQQLQLRCNAHDMAMAAWWLDCCDDRGYLEGEPTELARQGAAQLRDALPEVDAESLMAVRQRLLLDGDWPGMAAADPRECLMAQLRALPASDTRTLALRMVGEQLDALARHDLAAIAERLGASAADLSAAVSLVLSLQPHPVEQPPEPEPAFIVPDVIAWRAGGGWQVRLNTRSAPRLRLCAHAEQASGHAGMRGLLDEARWLLRSLGIRNETLLKTARALVTRQQAFLEQGEEAIAPLTLKEVAEEIGVHESTVSRITTGKYIQTPRGTLELKRLFAVRLEGAEVSGAAIKAMVRRLIEDEPAHAPLADEVIAAMLARQGIRVARRTVAKYREQLSIAPARMRRREQAPAPMARLG*