ggKbase home page

scnpilot_solids2_trim150_scaffold_24712_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 3..509

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide biosynthesis protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DPT9_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 245
  • Evalue 2.90e-62
Capsular biosynthesis protein {ECO:0000313|EMBL:KJC56222.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 153.0
  • Bit_score: 248
  • Evalue 6.30e-63
capsular polysaccharide biosynthesis protein; K13013 O-antigen biosynthesis protein WbqV similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 245
  • Evalue 9.20e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
AAGGCTCAAATCGAAGCTGGCGGGCCCGTCACGGTGACCCATCCCGATATGGTGCGCTACTTCATGACGATTCGGGAGGCCTGTGATCTGGTGATCACAGCGGCAACCCACGCTCTGACGCCGGTCCATCCGGACGTTTCGGTCTACGTACTGAATATGGGGCAACCTGTCAGAATCGTCGAACTCGCCGAGCGGCTGATCGAACTGTCGGGCCTCCAGGTCGGCCACGATATTGATATTGTTTTTTCAGGGATGCGCCCTGGAGAACGGCTGAATGAAATATTGTTTACGAGTCACGAGCCGACGATCGAAATCGGACTTCCCGGAATTATGGCGGCGAAGCCGCACGAGCCTTCGATGCAGGCCGTTCGAAAGTGGGTGGGCATTCTTGAAACGGCGATTGCAAATGATGACCGCGCTACGATCAAGTCGATCCTGGTTAACGCGGTGCCCGAATTTGACGGCTTGAGTCAATCTGCTTCCACCACTGCTATCGTCGTTCCGTAA
PROTEIN sequence
Length: 169
KAQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALTPVHPDVSVYVLNMGQPVRIVELAERLIELSGLQVGHDIDIVFSGMRPGERLNEILFTSHEPTIEIGLPGIMAAKPHEPSMQAVRKWVGILETAIANDDRATIKSILVNAVPEFDGLSQSASTTAIVVP*