ggKbase home page

scnpilot_solids2_trim150_scaffold_28457_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(2..478)

Top 3 Functional Annotations

Value Algorithm Source
type I site-specific deoxyribonuclease, HsdR family; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 161.0
  • Bit_score: 134
  • Evalue 2.80e-29
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002B777C4 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 159.0
  • Bit_score: 227
  • Evalue 1.00e-56
Restriction-modification system endonuclease {ECO:0000313|EMBL:KGM55009.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 158.0
  • Bit_score: 240
  • Evalue 1.60e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAACGAAAATCACCTCGAAGCCGTTTGCCTCGACTGGCTCGCCAGCCTCGGGTGGACATGCCTGCATGGCGACGCCGTATCGCCAGGCGGCGAGCAGGCGGCGAGAGAGCGCTACGCCGATGTCGTGTTGGCGCCGCGACTGCGCGACGCAGTGTCACGCCTTGCCCCTGATCTGGAGCCGACCGAGGTGGATGAGGTTGTCGCCAAGGTCGCGAGCTACGGCTCGCAGTCGCTGGTCGACGGCAACCGCGAGATGTACGACTGGCTGCGCAATGGCGTACCGCTGGAGCGCATCGAGCCAGACGGGCGGCGCAGCGTACTGCGCGTGCCGGTGATCGACTTCGACGGCCCCAACGACCTTCTCGCGGTTCAGCAATTCACCGTCCACGGCCAGAAGCTCCGCCGACCGGACCTGCTGCTGTTCGTCAATGGTTTGCCGCTGGTGGTGATCGAGCTGAAGAACCCGGCCGATCCG
PROTEIN sequence
Length: 159
MNENHLEAVCLDWLASLGWTCLHGDAVSPGGEQAARERYADVVLAPRLRDAVSRLAPDLEPTEVDEVVAKVASYGSQSLVDGNREMYDWLRNGVPLERIEPDGRRSVLRVPVIDFDGPNDLLAVQQFTVHGQKLRRPDLLLFVNGLPLVVIELKNPADP