ggKbase home page

scnpilot_solids2_trim150_scaffold_3245_5

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 1250..2122

Top 3 Functional Annotations

Value Algorithm Source
GH3 auxin-responsive promoter n=1 Tax=Niabella soli DSM 19437 RepID=H1NKH8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 290.0
  • Bit_score: 420
  • Evalue 1.50e-114
Gh3 auxin-responsive promoter {ECO:0000313|EMBL:AHF16908.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 290.0
  • Bit_score: 420
  • Evalue 2.10e-114
GH3 auxin-responsive promoter similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 288.0
  • Bit_score: 414
  • Evalue 3.40e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGACTTTGATAAGTGGCATTCCGCCATGGATGCAAATGTATTTCGATGAAATTCAAAAAAGGACCCACAAACAGATCAGGGAAGTATTTCCTTCGCTCAGCGTAATCGTTCACGGCGGCGTCAATTTTGAACCTTACAAAGCAAAACTTTTTGAAAGCATTGGTAAAAAAGTGGATGCCATCGAAACCTATCCTGCAAGTGAAGGATTCATTGCTTTTCAATACAGCACGGAAGAAAACGGTTTGCTGCTCAATACCAATAGCGGAATATTTTATGAATTTATACCTGTTGAGGAAATAGGAAAACCAAATCCGATCAGGCTTACTTTGGGCGAAGTGGAATTGAATAAAAATTATGCAATCATCATTTCTTCCAATGCGGGATTGTGGGCTTACAATATTGGAGATACCATAAAATTCACTTCATTGAATCCGTATAAAATTGTGGTCACAGGGCGTATCAAACATTTTATCAGCGCCTTTGGTGAACACGTCATTTCGGAAGAAGTGGAAGATGCCCTGACCAATGCAGCCAGTGAAGAAAATATAAAAATTACTGAATTTACCGTTGCTCCTTTTGTTTCTGAATCCAACGGGAAAAGTCATCATGAATGGTTTATTGAATTTGAAAATGAACCGGATAATTTGAGTGAATTCGCATTGAAGGTGGATCAGAACCTTCGCAGGAAAAATATTTATTACAATGACCTGATCAAGGGTAATATTTTAGAACCGCTTACCATTTTTTCTGTTCCCAAGGGAGGGTTTATTCAATACATGAAGACGGTGGGAAAACTGGGCGGACAGAATAAAGTGCCGCGCCTCAGTAACGACCGGAAAGTGGCAGACGAATTATTGAAATTCGGAAAATAA
PROTEIN sequence
Length: 291
MTLISGIPPWMQMYFDEIQKRTHKQIREVFPSLSVIVHGGVNFEPYKAKLFESIGKKVDAIETYPASEGFIAFQYSTEENGLLLNTNSGIFYEFIPVEEIGKPNPIRLTLGEVELNKNYAIIISSNAGLWAYNIGDTIKFTSLNPYKIVVTGRIKHFISAFGEHVISEEVEDALTNAASEENIKITEFTVAPFVSESNGKSHHEWFIEFENEPDNLSEFALKVDQNLRRKNIYYNDLIKGNILEPLTIFSVPKGGFIQYMKTVGKLGGQNKVPRLSNDRKVADELLKFGK*