ggKbase home page

scnpilot_solids2_trim150_scaffold_4226_5

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3896..4951)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase family 2 id=4726996 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 25.7
  • Coverage: 179.0
  • Bit_score: 72
  • Evalue 9.20e-10
glycosyltransferase similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 158.0
  • Bit_score: 67
  • Evalue 9.40e-09
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.1
  • Coverage: 231.0
  • Bit_score: 73
  • Evalue 5.80e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF03_38_15 → RIF3 → Bacteria

Sequences

DNA sequence
Length: 1056
TTGTTTCTGTTCGATTCATCCGGTCAGGTTGCAATCGACAACAGCTATATCACAAAGATTGCAGAAAAATTTTTGAATCTTAACCCGGTTATCGTTCGAACCAAAGTATTTCTGCCCGCTCAGAAGAACAATCCGGGAACAACGTTATGGGACCTTTCAAAAAAAATAAATAATTCTCTTCCCTTCATCAAAGCTTATTATGCCGGAGTGATAAGTAAATGGATCAATGAATCGGAAAATTCAGTCGTCGCAGGAAATGAAGATGACTTCTTTTTTAAGGTCTTATTCCGGTTACGTAATAAACAAACTAAAATTGTCGTATATGAAGAAGAGAGTTTATTTCCGGAGCTGACAGAATTATTGAAAAATAATATGGAAGCCGTATTCAACTCTGAATACCTGGAGCAGCGTGCAAAAGATTTTTTAAAGAATCGGATTACAGATAATCAATTATTGAACCATCTCCATGTCATTGCTCCGCCATTTGCCATTCCACCCAAACCCGTTATCTATCGCAACGAGCAGCTTGAATGTATTTATTTTGGAAGTGAATTACCTGCCCAACGAGCCTCACTCCTTGAATCAACGGCAAAAAAAATGTTACAGAAACCCATTGCCGTTCATTTTTCAATTATCGGCAAGGTGGATTATGTGATCGACAAAACCGGTTTAACCAATTGTACTTTCTATGGTGATATCAGGGATCCTGAAAAATTAAAAGCCATAATTTCCAAAGCGGATACATTGATGATAACATCAAAAACCGGAAATATTCCAAGGGGATTATTGGAAATGTTTGCAATGGGAAAACCTGTTATTTCAACGACGGTAGGAGCCGTTCCGGATTATATTAAAGACGGCGTAAACGGATACCTGATCCCGGAAAATAAAATCGAAAGTAAAATGATGGAAGATTACATCATCGCTTTATCCATTATCGGTGCTGACCGGATTACTTTAATCGAAATTGCACAACGCAATCATAAAAAGGCTAATGAATTGCTCAATGAACAATTGTTCATTAAGAAATGGAAGGAAATTATTCCTCCGTATTGA
PROTEIN sequence
Length: 352
LFLFDSSGQVAIDNSYITKIAEKFLNLNPVIVRTKVFLPAQKNNPGTTLWDLSKKINNSLPFIKAYYAGVISKWINESENSVVAGNEDDFFFKVLFRLRNKQTKIVVYEEESLFPELTELLKNNMEAVFNSEYLEQRAKDFLKNRITDNQLLNHLHVIAPPFAIPPKPVIYRNEQLECIYFGSELPAQRASLLESTAKKMLQKPIAVHFSIIGKVDYVIDKTGLTNCTFYGDIRDPEKLKAIISKADTLMITSKTGNIPRGLLEMFAMGKPVISTTVGAVPDYIKDGVNGYLIPENKIESKMMEDYIIALSIIGADRITLIEIAQRNHKKANELLNEQLFIKKWKEIIPPY*