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scnpilot_solids2_trim150_scaffold_6259_8

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 5764..6318

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLK8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 180.0
  • Bit_score: 181
  • Evalue 5.70e-43
DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 180.0
  • Bit_score: 181
  • Evalue 1.80e-43
DNA repair protein RadC {ECO:0000313|EMBL:AEV96577.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 180.0
  • Bit_score: 181
  • Evalue 8.00e-43

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGGAAAGTTCTCACAAGTCTTCCACCGGAATTAAAAACTGGGCACCAGATGATCGTCCGCGGGAAAAATTATTGGCTAAGGGAAAAGAAGCGCTTAGCGATTCAGAATTATTGGCCATCCTTTTACATACAGGCAGTGGGGAAAAAACTGCAGTGGACCTGGCAAAAGAAATTCTCGCTGAATCAGGAAATAATTTGATTGAACTGGGGAAAAAATCTGTAGAGTCACTGACAAAAATAAAGGGGATAGGACGGGCAAAAGCCATAAGCATCATTGCTGCAATGGAATTAGGAAGGCGACGGAATGAATCAACCCTGGATCTGAAAACCATCAAAGACAGCAGGGATATTGCTATTTTTTTACGTAACCGGTTAAAAGATTTAAGCAAAGAAGTTTTTGTTGTGGTTTTTCTCAATGCACGCCACAACATTTTAAATCATGAAATTATTAGCACCGGTGGTTTTACCAATACACTGGCCGATCTGAGGGTAATTTTTAACCGTGCCCTGGAATTAAAAGCTGTCAAACTTATCCTTTGTCATAATCAAACCTGA
PROTEIN sequence
Length: 185
MESSHKSSTGIKNWAPDDRPREKLLAKGKEALSDSELLAILLHTGSGEKTAVDLAKEILAESGNNLIELGKKSVESLTKIKGIGRAKAISIIAAMELGRRRNESTLDLKTIKDSRDIAIFLRNRLKDLSKEVFVVVFLNARHNILNHEIISTGGFTNTLADLRVIFNRALELKAVKLILCHNQT*