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scnpilot_solids2_trim150_scaffold_11195_3

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3063..3884)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B3AD56 similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 270.0
  • Bit_score: 226
  • Evalue 3.90e-56
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ02245.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 283.0
  • Bit_score: 224
  • Evalue 1.60e-55
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 275.0
  • Bit_score: 218
  • Evalue 3.30e-54

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Taxonomy

Gillisia limnaea → Gillisia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 822
GTGTCTGATGCGAACAAGAAGCCGCGGAGTAGTGTGGAGGAGACCTATCAGCAAATCATAAATGACCTGACAACTGCAAAATCTCTCATGGAAGACCAGATCGGTGTATATGCAGGGAAATACACAGCGGCCGCAGTTCTGTCGAGAGTGTATCTGCAGATGGCCGATTATCAAAAAGCAGCTCAGGAAGCCAATGATGTGATTGAAAACTCCGGAGCATCTCTGGAAAGCGATTGCAGAAAAGCATTTAATAATTCCTCCCCTTCTTCCGAAGATATTTATGTGATGCCGGTTACTCCGCAAGACGGATCCAATGACATGTGGCTGTTTTGGTCAATCGGCGACTATGGCGCCCGCGATGGCGATGTGGAAGTGGATCAAAAACAAATTGATCTTTTCGCGAGCGGCGACCAGAGATTGGGTTGGTTCTATATTGATGAAAGCGATATTTACCGTTCGGCCAAATGGCAATTCCAGTACCGCTATCTTCCTGTAATCAGGCTTGCTGAAATGTACCTCACCCGCGCAGAATGCAATGCACGCTTAGGTACTTCAATAGGAGCAACCGCTGATGAAGATTTAAACGATGTAATAAGAGCGAGAGCCGGATTGGGCGCTGTCTCTGCAACCGTTGATAATATCATTTATGAAAGGAGGTTAGAGCTGGTTGATGAAGGACAAAAAATTCACGACATAAGGAGATTAAAACAATCAGTTGACGGATTTCAATACAACGATAACAAACTCGTTTGTCCGATTCCGCAACGTGAGGTGGATGCCGGTAATGGTATTCTGACTCAAAATCCCGGATACAATCCTTAA
PROTEIN sequence
Length: 274
VSDANKKPRSSVEETYQQIINDLTTAKSLMEDQIGVYAGKYTAAAVLSRVYLQMADYQKAAQEANDVIENSGASLESDCRKAFNNSSPSSEDIYVMPVTPQDGSNDMWLFWSIGDYGARDGDVEVDQKQIDLFASGDQRLGWFYIDESDIYRSAKWQFQYRYLPVIRLAEMYLTRAECNARLGTSIGATADEDLNDVIRARAGLGAVSATVDNIIYERRLELVDEGQKIHDIRRLKQSVDGFQYNDNKLVCPIPQREVDAGNGILTQNPGYNP*