name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_119_60
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(56930..58252)
----------------- DNA (1323bp) protein (441aa) |
membrane protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E474B9
rbh
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:KJL18285.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hemolysins
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_61
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(58538..59428)
----------------- DNA (891bp) protein (297aa) |
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B739DA
Uncharacterized protein {ECO:0000313|EMBL:KJL27229.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_119_62
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(59899..61359)
----------------- DNA (1461bp) protein (487aa) |
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:KJL30985.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KJL30985.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Inosine 5'-monophosphate dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHM2_9MICO
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_63
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
61520..65194
----------------- DNA (3675bp) protein (1225aa) |
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:EYT59653.1}; EC=4.1.1.71 {ECO:0000313|EMBL:EYT59653.1};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
kgd; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
rbh
alpha-ketoglutarate decarboxylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037FD097
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_64
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(65258..66559)
----------------- DNA (1302bp) protein (434aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000311239A
rbh
Enhanced intracellular survival protein {ECO:0000313|EMBL:KJQ55879.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
acetyltransferase
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_65
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(66599..66844)
----------------- DNA (246bp) protein (82aa) |
alpha-ketoglutarate decarboxylase n=1 Tax=Microbacterium barkeri RepID=UPI0003187560
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88349.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
transmembrane transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_119_66
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(66841..67506)
----------------- DNA (666bp) protein (222aa) |
RNA polymerase sigma factor RpoE n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003487A57
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYT59656.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
scnpilot_solids2_trim150_scaffold_119_67
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
67555..68880
----------------- DNA (1326bp) protein (442aa) |
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
5-enolpyruvylshikimate-3-phosphate synthase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036D5D15
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_68
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria
|
Not on your lists |
68877..69920
----------------- DNA (1044bp) protein (348aa) |
ribosome small subunit-dependent GTPase A n=1 Tax=Microbacterium barkeri RepID=UPI0002F21671
rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
|
|
scnpilot_solids2_trim150_scaffold_119_69
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
69930..70406
----------------- DNA (477bp) protein (159aa) |
bcp; peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
peroxiredoxin n=1 Tax=Microbacterium barkeri RepID=UPI0002F9D93C
Peroxiredoxin {ECO:0000313|EMBL:KDA06653.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
|
|
scnpilot_solids2_trim150_scaffold_119_70
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(70413..70841)
----------------- DNA (429bp) protein (143aa) |
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000312109A
Histidine kinase {ECO:0000313|EMBL:KDA06652.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
signal transduction histidine kinase
|
|
scnpilot_solids2_trim150_scaffold_119_71
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
71057..71305
----------------- DNA (249bp) protein (83aa) |
transcription factor WhiB n=1 Tax=Microbacterium yannicii RepID=UPI0002DC4CB7
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
regulatory protein
|
|
scnpilot_solids2_trim150_scaffold_119_72
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(71395..72480)
----------------- DNA (1086bp) protein (362aa) |
TOBE domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WTI5_PROPF
rbh
TOBE domain-containing protein
rbh
TOBE domain protein {ECO:0000313|EMBL:AFN46501.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
|
|
scnpilot_solids2_trim150_scaffold_119_73
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(72483..73376)
----------------- DNA (894bp) protein (298aa) |
ABC transporter, permease protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y0M4_PROPF
rbh
ABC transporter permease
rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AFN47127.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
|
|
scnpilot_solids2_trim150_scaffold_119_74
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(73369..74292)
----------------- DNA (924bp) protein (308aa) |
ABC transporter, permease protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y6F0_PROPF
rbh
ABC transporter permease
rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AFN47745.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
|
|
scnpilot_solids2_trim150_scaffold_119_75
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(74305..75627)
----------------- DNA (1323bp) protein (441aa) |
ABC transporter, solute-binding protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XLL8_PROPF
rbh
ABC transporter substrate-binding protein
rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AFN44948.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
|
|
scnpilot_solids2_trim150_scaffold_119_76
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(75662..76666)
----------------- DNA (1005bp) protein (335aa) |
Oxidoreductase, NAD-binding domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y1F3_PROPF
oxidoreductase, NAD-binding domain protein
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:AFN47462.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
|
|
scnpilot_solids2_trim150_scaffold_119_77
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
76830..78047
----------------- DNA (1218bp) protein (406aa) |
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A8D6D
rbh
ROK family protein {ECO:0000313|EMBL:EMF57049.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
XylR-type repressor
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_78
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(78067..79539)
----------------- DNA (1473bp) protein (491aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ATPase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHL3_9MICO
rbh
signal transduction histidine kinase
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_79
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(79590..79982)
----------------- DNA (393bp) protein (131aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036F87F8
Uncharacterized protein {ECO:0000313|EMBL:KJQ55870.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
3-hydroxyacyl-CoA dehydrogenase
|
|
scnpilot_solids2_trim150_scaffold_119_80
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
80092..80745
----------------- DNA (654bp) protein (218aa) |
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIE7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06649.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_119_81
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(80803..81081)
----------------- DNA (279bp) protein (93aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003458528
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88358.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_119_82
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
81179..81793
----------------- DNA (615bp) protein (205aa) |
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMK6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ55867.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_119_83
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
81790..82986
----------------- DNA (1197bp) protein (399aa) |
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037C32FF
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:KJQ55866.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_119_84
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(82934..84157)
----------------- DNA (1224bp) protein (408aa) |
Glutamate-pyruvate aminotransferase AlaA {ECO:0000313|EMBL:KJQ55865.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KJQ55865.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
aminotransferase AlaT n=1 Tax=Microbacterium barkeri RepID=UPI0002F1FD6E
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_85
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(84188..84835)
----------------- DNA (648bp) protein (216aa) |
transcriptional regulator n=1 Tax=Nocardiopsis alba RepID=UPI00034BE7B1
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL27248.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bacterial regulatory s, gntR family protein
|
|
scnpilot_solids2_trim150_scaffold_119_86
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(84942..87701)
----------------- DNA (2760bp) protein (920aa) |
preprotein translocase subunit SecA n=1 Tax=Microbacterium barkeri RepID=UPI000379544C
rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
rbh
|
|
scnpilot_solids2_trim150_scaffold_119_87
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
87913..88506
----------------- DNA (594bp) protein (198aa) |
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000381F632
rbh
Transcriptional regulator {ECO:0000313|EMBL:KHK98896.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative PadR family transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_119_88
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
88503..89222
----------------- DNA (720bp) protein (240aa) |
ABC transporter n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036BBE21
rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK98897.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
|
|
scnpilot_solids2_trim150_scaffold_119_89
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
89219..91912
----------------- DNA (2694bp) protein (898aa) |
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003817FB1
rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98898.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
|